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• YeeE/YedE family protein
• YeiH family putative sulfate export transporter
• Y-family DNA polymerase
• YfhO family protein
• YggS family pyridoxal phosphate-dependent enzyme
• YggT family protein
• YhgE/Pip domain-containing protein
• YigZ family protein
• YihA family ribosome biogenesis GTP-binding protein
• YihY/virulence factor BrkB family protein
• YitT family protein
• YkgJ family cysteine cluster protein
• YlbF family regulator
• YlbF/YmcA family competence regulator
• YlbG family protein
• YlxQ-related RNA-binding protein
• YlxR family protein
• YneF family protein
• YozE family protein
• YpmS family protein
• YqeG family HAD IIIA-type phosphatase
• YqgQ family protein
• YSIRK-type signal peptide-containing protein
• YueI family protein
• YvcK family protein
• YwaF family protein
• zinc ABC transporter substrate-binding protein AdcA
• zinc metalloprotease HtpX