OpenGenomeBrowser
Tools
TAXID 1308
ORGANISM FAM13496
GENOME FAM13496-i1-1.1
GENE FAM13496-i1-1.1_000009
locus tag:
FAM13496-i1-1.1_000009
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
Type
Name
Description
Pathways
Gene Product
type II CRISPR RNA-guided endonuclease Cas9
Ortholog
N0.HOG0004792 type II CRISPR RNA-guided endonuclease Cas9
KEGG gene
K09952 csn1, cas9; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Eggnog Protein
EP:cas9
Eggnog Ortholog
EO:COG3513
Eggnog Description
ED:CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses
Gene Code
cas9
Sequences
Nucleotide sequence (GC-content: 35.2 %):
A T G A G T G A C T T A G T T T T A G G A C T T G A T A T C G G T A T A G G T T C T G T T G G T G T A G G T A T C C T T A A C A A A G T G A C A G G A G A A A T T A T C C A T A A A A A C T C A C G C A T T T T C C C A G C A G C T C A A G C G G A A A A T A A C C T A G T A C G T A G A A C G A A T C G T C A A G G A A G A C G C T T G A C A C G A C G T A A A A A A C A T C G T A G A G T T C G T T T A A A T C G T C T A T T T G A G G A A A G T G G A T T A A T C A C C G A T T T T A C G A A G A T T T C A A T T A A T C T T A A C C C A T A T C A A T T A C G A G T T A A G G G C T T G A C C G A T G A A T T G T C T A A T G A A G A A C T G T T T A T C G C T C T T A A A A A T A T G G T G A A A C A C C G T G G G A T T A G T T A C C T C G A T G A T G C T A G T G A T G A C G G A A A T T C A T C A G T A G G A G A C T A T G C A C A A A T T G T T A A G G A A A A T A G T A A A C A A T T A G A A A C T A A G A C A C C G G G A C A G A T T C A G T T G G A A C G C T A C C A A A C A T A T G G T C A A T T A C G T G G T G A T T T T A C T G T T G A G A A A G A T G G C A A A A A A C A T C G C T T G A T T A A T G T C T T T C C A A C A T C A G C T T A T C G T T C A G A A G C C T T A A G G A T A C T G C A A A C T C A A C A A G A A T T T A A T C C A C A G A T T A C A G A T G A A T T T G T T A A T C G T T A T C T C G A A A T T T T A A C T G G A A A A C G G A A A T A T T A T C A T G G A C C C G G A A A T G A A A A G T C A C G G A C T G A T T A T G G T C G T T A C A G A A C G A A T G G A G A A A C T T T A G A C A A T A T T T T T G G A A T T C T A A T T G G G A A A T G T A C A T T T T A T C C A G A A G A G T T T A G A G C A G C A A A A G C T T C C T A C A C G G C T C A A G A A T T C A A T T T G C T A A A T G A T T T G A A C A A T C T A A C A G T T C C T A C T G A A A C C A A A A A G T T G A G C A A A G A A C A G A A G A A T C A A A T C A T T A A T T A T G T C A A A A A T G A A A A G G C A A T G G G G C C A G C G A A A C T T T T T A A A T A T A T C G C T A A G T T A C T T T C T T G T G A T G T T G C A G A T A T C A A G G G A T A C C G T A T C G A C A A A T C A G G T A A G G C T G A G A T T C A T A C T T T C G A A G C C T A T C G A A A A A T G A A A A C G C T T G A A A C C T T A G A T A T T G A G C A A A T G G A T A G A G A A A C G C T T G A T A A A T T A G C C T A T G T C T T A A C A T T A A A C A C T G A G A G G G A A G G T A T T C A A G A A G C C T T A G A A C A T G A A T T T G C T G A T G G T A G C T T T A G C C A G A A G C A A G T T G A C G A A T T G G T T C A A T T C C G C A A A G C A A A T A G T T C C A T T T T T G G A A A A G G A T G G C A T A A T T T T T C T G T C A A A C T G A T G A T G G A G T T A A T T C C A G A A T T G T A T G A G A C G T C A G A A G A G C A A A T G A C T A T C C T G A A A C G A C T T G G A A A A C A A A A A A C G A C C T C G T C T T C A A A T A A A A C A A A A T A T A T A G A T G A G A A A C T A T T A A C T G A A G A A A T C T A T A A T C C T G T T G T T G C T A A G T C T A T T C G C C A G G C T A T A A A A A T C G T A A A T G C G G C G A T T A A A G A A T A C G G A G A C T T T G A C A A T A T T G T C A T C G A A A T G G C T C G T G A A A C A A A T G A A G A T G A T G A A A A G A A A G C T A T T C A A A A G A T T C A A A A A G C C A A C A A A G A T G A A A A A G A T G C A G C A A T G C T T A A G G C T G C T A A C C A A T A T A A T G G A A A G G C T G A A T T A C C A C A T A G T G T T T T C C A C G G T C A T A A G C A A T T A G C G A C T A A A A T C C G C C T T T G G C A T C A G C A A G G A G A A C G T T G C C T T T A T A C T G G T A A G A C A A T C T C A A T C C A T G A T T T G A T A A A T A A T C C T A A T C A G T T T G A A G T A G A T C A T A T T T T A C C T C T T T C T A T C A C A T T C G A T G A T A G C C T T G C A A A T A A G G T T T T G G T T T A T G C A A C T G C T A A C C A A G A A A A A G G A C A A C G A A C A C C T T A T C A G G C T T T A G A T A G T A T G G A T G A T G C G T G G T C T T T C C G T G A A T T A A A A G C T T T T G T A C G T G A G T C A A A A A C A C T T T C G A A C A A G A A A A A A G A A T A C C T C C T C A C A G A A G A A G A T A T T T C A A A G T T T G A T G T T C G A A A G A A A T T T A T T G A A C G A A A T C T T G T A G A T A C A A G A T A C G C T T C A A G A G T T G T C C T C A A T G C C C T T C A A G A A C A C T T T A G A G C T C A C A A G A T T G A T A C A A A A G T T T C C G T G G T T C G T G G C C A A T T T A C A T C T C A A T T G A G A C G C C A T T G G G G A A T T G A G A A G A C T C G T G A T A C T T A T C A T C A C C A T G C T G T C G A T G C A T T G A T T A T T G C C G C C T C A A G T C A G T T G A A T T T G T G G A A A A A A C A A A A G A A T A C C C T T G T A A G T T A T T C A G A A G A C C A A C T C C T T G A T A T T G A A A C A G G T G A A C T T A T T A G T G A T G A T G A G T A C A A G G A A T C T G T G T T C A A A G C C C C T T A T C A A C A T T T T G T T G A T A C A T T G A A G A G T A A A G A A T T T G A A G A C A G T A T C T T A T T C T C A T A T C A A G T G G A T T C T A A G T T T A A T C G T A A A A T A T C A G A T G C C A C T A T T T A T G C G A C A A G A C A G G C T A A A G T A G G A A A A G A T A A G G C G G A T G A A A C T T A T G T C T T A G G G A A A A T C A A A G A T A T T T A T A C T C A G G A T G G T T A T G A T G C C T T T A T G A A G A T T T A T A A G A A G G A T A A G T C A A A A T T C C T C A T G T A T C G T C A C G A C C C A C A A A C C T T T G A G A A A G T T A T C G A G C C A A T T T T A G A G A A C T A T C C T A A T A A G C A A A T G A A T G A A A A A G G G A A A G A G G T A C C A T G T A A T C C T T T C C T A A A A T A T A A A G A A G A A C A T G G C T A T A T T C G T A A A T A T A G T A A A A A A G G C A A T G G T C C T G A A A T C A A G A G T C T T A A A T A C T A T G A T A G T A A G C T A G G C A A T C A T A T T G A T A T T A C T C C G A A G G A T A G T A A C A A T A A A G T T G T C T T A C A G T C A G T T T C T C C A T G G A G A G C G G A C A T C T A T T T C A A T A A T A C T A C T G G A A A A T A C G A A A T C C T C G G A T T G A A A T A T G C T G A T T T A C A A T T T G A A A A A G G G A C A G G A A C A T A T A A G A T T T C C C A G G A A A A A T A C A A T G A C A T T A A G A A A A A A G A G G G T G T G G A T T C T G A T T C A G A A T T C A A G T T T A C A C T T T A T A A A A A T G A T T T G T T A C T C G T T A A A G A A A C A G A A A C A A A A G A A C A A C A G C T T T T C C G T T T T C T T T C T C G A A C T A T G C C T A A A C A A A A G C A T T A T G T T G A A T T A A A A C C T T A T G A T A A A C A G A A A T T T G A A G G A G G T G A G G C G T T A A T T A A A G T G T T G G G T A A C G T T G C T A A T G G T G G T C A A T G C A T A A A A G G G C T A G G A A A A T C A A A T A T T T C T A T T T A T A A G G T A A G A A C A G A T G T C C T A G G A A A T C A G C A T A T C A T C A A A A A T G A G G G T G A T A A G C C T A A G C T A G A T T T T T A A
Protein sequence:
M S D L V L G L D I G I G S V G V G I L N K V T G E I I H K N S R I F P A A Q A E N N L V R R T N R Q G R R L T R R K K H R R V R L N R L F E E S G L I T D F T K I S I N L N P Y Q L R V K G L T D E L S N E E L F I A L K N M V K H R G I S Y L D D A S D D G N S S V G D Y A Q I V K E N S K Q L E T K T P G Q I Q L E R Y Q T Y G Q L R G D F T V E K D G K K H R L I N V F P T S A Y R S E A L R I L Q T Q Q E F N P Q I T D E F V N R Y L E I L T G K R K Y Y H G P G N E K S R T D Y G R Y R T N G E T L D N I F G I L I G K C T F Y P E E F R A A K A S Y T A Q E F N L L N D L N N L T V P T E T K K L S K E Q K N Q I I N Y V K N E K A M G P A K L F K Y I A K L L S C D V A D I K G Y R I D K S G K A E I H T F E A Y R K M K T L E T L D I E Q M D R E T L D K L A Y V L T L N T E R E G I Q E A L E H E F A D G S F S Q K Q V D E L V Q F R K A N S S I F G K G W H N F S V K L M M E L I P E L Y E T S E E Q M T I L K R L G K Q K T T S S S N K T K Y I D E K L L T E E I Y N P V V A K S I R Q A I K I V N A A I K E Y G D F D N I V I E M A R E T N E D D E K K A I Q K I Q K A N K D E K D A A M L K A A N Q Y N G K A E L P H S V F H G H K Q L A T K I R L W H Q Q G E R C L Y T G K T I S I H D L I N N P N Q F E V D H I L P L S I T F D D S L A N K V L V Y A T A N Q E K G Q R T P Y Q A L D S M D D A W S F R E L K A F V R E S K T L S N K K K E Y L L T E E D I S K F D V R K K F I E R N L V D T R Y A S R V V L N A L Q E H F R A H K I D T K V S V V R G Q F T S Q L R R H W G I E K T R D T Y H H H A V D A L I I A A S S Q L N L W K K Q K N T L V S Y S E D Q L L D I E T G E L I S D D E Y K E S V F K A P Y Q H F V D T L K S K E F E D S I L F S Y Q V D S K F N R K I S D A T I Y A T R Q A K V G K D K A D E T Y V L G K I K D I Y T Q D G Y D A F M K I Y K K D K S K F L M Y R H D P Q T F E K V I E P I L E N Y P N K Q M N E K G K E V P C N P F L K Y K E E H G Y I R K Y S K K G N G P E I K S L K Y Y D S K L G N H I D I T P K D S N N K V V L Q S V S P W R A D I Y F N N T T G K Y E I L G L K Y A D L Q F E K G T G T Y K I S Q E K Y N D I K K K E G V D S D S E F K F T L Y K N D L L L V K E T E T K E Q Q L F R F L S R T M P K Q K H Y V E L K P Y D K Q K F E G G E A L I K V L G N V A N G G Q C I K G L G K S N I S I Y K V R T D V L G N Q H I I K N E G D K P K L D F
GenBank Info
gene - cas9
Gene Locus
Located on scaffold FAM13496-i1-1_scf1
FAM13496-i1-1.1_000008
