update range to 10000 bp
locus tag: FAM13496-i1-1.1_000028 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 shikimate dehydrogenase
KEGG reaction
 R02413 Shikimate:NADP+ 3-oxidoreductase; Shikimate + NADP+ <=> 3-Dehydroshikimate + NADPH + H+ kornec00400kornec01100kornec01110kornec01230
Ortholog
 N0.HOG0001087 shikimate dehydrogenase
KEGG gene
 K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] kornec00400kornec01100kornec01110kornec01230
Gene Ontology
 GO:1901615 organic hydroxy compound metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901265 nucleoside phosphate binding
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0055114 obsolete oxidation-reduction process
Gene Ontology
 GO:0050662 obsolete coenzyme binding
Gene Ontology
 GO:0050661 NADP binding
Gene Ontology
 GO:0048037 obsolete cofactor binding
Gene Ontology
 GO:0046417 chorismate metabolic process
Gene Ontology
 GO:0046394 carboxylic acid biosynthetic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043650 dicarboxylic acid biosynthetic process
Gene Ontology
 GO:0043648 dicarboxylic acid metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0036094 small molecule binding
Gene Ontology
 GO:0032787 monocarboxylic acid metabolic process
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0019632 shikimate metabolic process
Gene Ontology
 GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Gene Ontology
 GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
Gene Ontology
 GO:0016491 oxidoreductase activity
Gene Ontology
 GO:0016053 organic acid biosynthetic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009423 chorismate biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0004764 shikimate 3-dehydrogenase (NADP+) activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000166 nucleotide binding
Eggnog Protein
 EP:aroE
Eggnog Ortholog
 EO:COG0169
Eggnog Description
 ED:Involved in the biosynthesis of the chorismate
EC Number
 EC:1.1.1.25 shikimate dehydrogenase (NADP+); shikimate dehydrogenase; dehydroshikimic reductase; shikimate oxidoreductase; shikimate:NADP+ oxidoreductase; 5-dehydroshikimate reductase; shikimate 5-dehydrogenase; 5-dehydroshikimic reductase; DHS reductase; shikimate:NADP+ 5-oxidoreductase; AroE kornec00400kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00400 Phenylalanine, tyrosine and tryptophan biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 40.0 %):

ATGCGGATTGATGGACACACACGCTTAGCAGCTGTTGTTGCCAGTCCTATCAAGCATTCAATTTCTCCTTTCATTCATAATTTAGCTTTCGAAAAAACACATGTTAATGGGGTTTATGTAGCTTGGGAAATTCCAGAGTCAGACCTGGCTGAGACAGTTGAAAATATTAGACGTTACAATATGTTCGGTATCAACTTGTCTATGCCATATAAGGAAAAGGTAATTCCATTTTTGGATGGTCTTAGTCCTGAAGCTCAACTGATTGGTGCAGTCAATACGGTTGTCAATCGTGATGGTCGTTTGATCGGCCATAATACAGATGGCTTTGGCTTTTTTGCTAGTTTAAAGAACTTTAATCCTAAGGATACTCATATTATGATTTTGGGGGCTGGTGGTGCGGCTAAATCTATTGTGACACAGGCAGTTCTTGATGGTGCAAAAAAAGTTAGTATCTATGTTCGGCCCCAATCCTTGGTCAAGGCAAAAGAAAACTTTAGAACCTTGCTTGATCAAACCGATTGCTATTTAGAATTTCATGATTTAACTGATGCTGACCACTTCCAAAAGGAATTAAGGCAAACCGATTTATTGGTCAATGCGACTAGTGTGGGTATGGATGGTGAGTCATTGCCCATTTCTATAGATACAAGATTCCCTAAGGAACTCTTAGTTGCGGATATCATTTACCAGCCTTTTGAAACACCTTTCTTGGCCTTGGCAAGGAAACAAGAGATAGAGGCTGTGAATGGACTAGGCATGTTACTTTATCAAGCAGCAGGTGCCTTTAAATTATGGACAGGCGAGAATATGCCAACAGGTGCTATTTGGCAGGAATTAGAAAACATATACAATAGCTAG

Protein sequence:

MRIDGHTRLAAVVASPIKHSISPFIHNLAFEKTHVNGVYVAWEIPESDLAETVENIRRYNMFGINLSMPYKEKVIPFLDGLSPEAQLIGAVNTVVNRDGRLIGHNTDGFGFFASLKNFNPKDTHIMILGAGGAAKSIVTQAVLDGAKKVSIYVRPQSLVKAKENFRTLLDQTDCYLEFHDLTDADHFQKELRQTDLLVNATSVGMDGESLPISIDTRFPKELLVADIIYQPFETPFLALARKQEIEAVNGLGMLLYQAAGAFKLWTGENMPTGAIWQELENIYNS

GenBank Info

locus_tag - FAM13496-i1-1.1_000028
EC_number - 1.1.1.25
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002947239.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - shikimate dehydrogenase
protein_id - extdb:FAM13496-i1-1.1_000028

Gene Locus

Located on scaffold FAM13496-i1-1_scf1

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM13496-i1-1.1_000027
FAM13496-i1-1.1_000029