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Tools
TAXID 1308
ORGANISM FAM13496
GENOME FAM13496-i1-1.1
GENE FAM13496-i1-1.1_000030
locus tag:
FAM13496-i1-1.1_000030
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
Type
Name
Description
Pathways
Ortholog
N0.HOG0004280 class I SAM-dependent rRNA methyltransferase
KEGG gene
K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Eggnog Protein
EP:ywbD
Eggnog Ortholog
EO:COG1092
Eggnog Description
ED:Methyltransferase
EC Number
EC:2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase; RlmI; rRNA large subunit methyltransferase I; YccW
Gene Product
class I SAM-dependent rRNA methyltransferase
Sequences
Nucleotide sequence (GC-content: 38.4 %):
A T G A A T A T A T T G A C G G T G A G T C C C T T T G C G G A G A A A A A A A T C A A A C A A G G G A A A C A G C T T C T T T T A G C T G A A G A T T T T C C A A A T A T A G C T G A A A A T A A T C A G T T G G T T T A T C T T T A T A G C C A A T C C A A A G A A T T T T T A G G A A C A G G C T A T T T G T C G A G T C A A A A T A A G G G G A T A G G T T G G T T T T T G T C C C C T A A A A A G C A A C A A T T G A C A G T G A C T T A T T T T C A G G G G C T T T T T G A G A A G G C A A A A G C T A G A C G T C A A T C C T A T T A T G C T A A T G A T T T A A C G A C G G C T T T T C G T C T T T T T A A C C A A G A T G G T G A T G A T T T T G G T G G T C T A A C G A T T G A T T T G T A T G G A G A C T A T G C C C T C T T T T C G T G G T A C A A T G T C T T T A T T T A T T C C T T G A A G G A T A T T A T T G T A G A G G C T T T C C A A A C G G T C T T T C C T G A G G T T T T G G G G G G C T A T G A A A A A A T T C G C T T C A A G G G C C T T G A T T T T G A G T C A G A C C A T C T T T A T G G A C A A G A G G C C G C T G A T A C C T T C A C T A T C T T G G A G A A T G G G G T A A C T T A T G A A G T T T T T C T A A A T G A T G G G C T A A T G A C A G G G A T T T T T C T T G A C C A G C A T G A G G T G C G T G A T G G T T T G G T T A A T G G T T T G G C C T T G G G C A A A T C A G T T T T G A A T A T G T T C T C C T A T A C G G C A G C T T T T T C A G T T G C T G C A G C T A T G G G G G G A G C G G T T G A A A C G A C A T C G G T G G A T T T G G C A A A A C G T T C A C G T G A G T T A T C C A C G G C T C A T T T T G A A G C T A A T G G C T T T A G T A T G G A A A A T C A T C G T T T A G T T G T G A T G G A T G T T T T T G A T T A T T T T A A A T A T G C C A A G A A A A A G G G A T T A T T T T A T G A C C T T A T C G T T A T A G A T C C G C C G T G C T T T G C T C G A A A T A A G A A A C G C A C T T T C T C A G C A A A T A A G G A T T A C C A C A A G T T G A T T G C G C A G A G T C T T G A T A T T C T A T C A G A G T A T G G G A C A A T T A T T G C A A G T A C C A A T G C A G C T A A T A T G A C A G T G C A A C A G T T T A A A A A G C A A C T G C G T A A G G G A T T G G G A G A T G T T T C A G C G G A C T T T G T T A A C T T G C A A C A A T T A C C A G T G G A T T T T G C C G T C A A T C C T A A T G A T C C A A C A T C A A A T T A T T T G A A A G T A T A C A C A A T A A A G G T A A A T A A A T G A
Protein sequence:
M N I L T V S P F A E K K I K Q G K Q L L L A E D F P N I A E N N Q L V Y L Y S Q S K E F L G T G Y L S S Q N K G I G W F L S P K K Q Q L T V T Y F Q G L F E K A K A R R Q S Y Y A N D L T T A F R L F N Q D G D D F G G L T I D L Y G D Y A L F S W Y N V F I Y S L K D I I V E A F Q T V F P E V L G G Y E K I R F K G L D F E S D H L Y G Q E A A D T F T I L E N G V T Y E V F L N D G L M T G I F L D Q H E V R D G L V N G L A L G K S V L N M F S Y T A A F S V A A A M G G A V E T T S V D L A K R S R E L S T A H F E A N G F S M E N H R L V V M D V F D Y F K Y A K K K G L F Y D L I V I D P P C F A R N K K R T F S A N K D Y H K L I A Q S L D I L S E Y G T I I A S T N A A N M T V Q Q F K K Q L R K G L G D V S A D F V N L Q Q L P V D F A V N P N D P T S N Y L K V Y T I K V N K
GenBank Info
locus_tag - FAM13496-i1-1.1_000030
Gene Locus
Located on scaffold FAM13496-i1-1_scf1
FAM13496-i1-1.1_000029
