update range to 10000 bp
locus tag: FAM13496-i1-1.1_000042 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 SsrA-binding protein SmpB
Gene Code
 smpB
Ortholog
 N0.HOG0001164 SsrA-binding protein SmpB
KEGG gene
 K03664 smpB; SsrA-binding protein
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0070930 trans-translation-dependent protein tagging
Gene Ontology
 GO:0044267 -
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043412 macromolecule modification
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0036211 protein modification process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006464 -
Eggnog Protein
 EP:smpB
Eggnog Ortholog
 EO:COG0691
Eggnog Description
 ED:the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide

Sequences

Nucleotide sequence (GC-content: 41.3 %):

ATGCCAAAAGGTGAAGGCAATGTTGTTGCTCAGAATAAAAAGGCGAGACATGACTATAGTATTGTAGATACTATTGAAGCGGGTATCGTGCTGACAGGGACAGAGATTAAGTCTGTTCGTGCGGCTCGCATCCAGCTAAAGGATGGTTACGCCCAAATAAAAAACGGGGAAGCTTGGTTAATCAATGTTCATATTGCTCCTTTTGAGCAAGGGAACATCTGGAATCAAGATCCAGAACGTACTCGGAAATTATTGCTCAAGAAAAAGCAAATCACCAAACTTCAAAATGATCTTAAAGGAACAGGGATGACCTTAGTCCCACTTAAGGTTTACCTAAAAAATGGTTTTGCCAAGGTTCTACTGGGTATCGCCAAAGGGAAGCACGATTACGATAAACGTGAGTCAATCAAACGTCGCGAACAAGAGCGTGACATTAAACGTATTATCAAGAGTGTTAACCGTTAA

Protein sequence:

MPKGEGNVVAQNKKARHDYSIVDTIEAGIVLTGTEIKSVRAARIQLKDGYAQIKNGEAWLINVHIAPFEQGNIWNQDPERTRKLLLKKKQITKLQNDLKGTGMTLVPLKVYLKNGFAKVLLGIAKGKHDYDKRESIKRREQERDIKRIIKSVNR

GenBank Info

gene - smpB
locus_tag - FAM13496-i1-1.1_000042
inference - COORDINATES: similar to AA sequence:RefSeq:NP_358473.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - SsrA-binding protein SmpB
protein_id - extdb:FAM13496-i1-1.1_000042

Gene Locus

Located on scaffold FAM13496-i1-1_scf1

FAM13496-i1-1.1_000041
FAM13496-i1-1.1_000043