update range to 10000 bp
locus tag: FAM13496-i1-1.1_000879 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 Tyrosine--tRNA ligase 1
KEGG reaction
 R02918 L-Tyrosine:tRNA(Tyr) ligase (AMP-forming); ATP + L-Tyrosine + tRNA(Tyr) <=> AMP + Diphosphate + L-Tyrosyl-tRNA(Tyr) kornec00970
Ortholog
 N0.HOG0001375 tyrosine--tRNA ligase
KEGG gene
 K01866 YARS, tyrS; tyrosyl-tRNA synthetase [EC:6.1.1.1] kornec00970
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140101 catalytic activity, acting on a tRNA
Gene Ontology
 GO:0140098 catalytic activity, acting on RNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043039 tRNA aminoacylation
Gene Ontology
 GO:0043038 amino acid activation
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0016875 ligase activity, forming carbon-oxygen bonds
Gene Ontology
 GO:0016874 ligase activity
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006399 tRNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004831 tyrosine-tRNA ligase activity
Gene Ontology
 GO:0004812 aminoacyl-tRNA ligase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:tyrS
Eggnog Ortholog
 EO:COG0162
Eggnog Description
 ED:Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EC Number
 EC:6.1.1.1 tyrosine---tRNA ligase kornec00970

Occurs in the following pathway maps:

Pathway Description
kornec00970 Aminoacyl-tRNA biosynthesis

Sequences

Nucleotide sequence (GC-content: 42.5 %):

ATGACAATTTTTGAAGAACTAAAAGCACGTGGCTTGATTTTTCAAACCACAGATGAAGAAGCCCTTGTAAAAGCCTTTGAAGAAGGGCCAGTCTCATTCTACACCGGTTATGACCCAACAGCAGACAGTCTCCACCTTGGACACCTCGTCGCTATCCTTACTAGTCGTCGCCTTCAATTGGCTGGCCACAAACCTTACGCCCTCGTTGGGGGTGCGACAGGTTTGATTGGTGACCCATCATTTAAAGATGCTGAGCGTAGCCTCCAAACCAAAGAAACCGTTGAAGGTTGGGTAGAAAAAATCCAAGGCCAACTCTCTCGCTTCCTTGATTTTGAAAATGGTGATAACAAAGCCGTTATGGTCAACAACTATGACTGGTTTGGTTCAGTTAGTTTCATCGATTTCTTGCGTGATGTCGGTAAATACTTCACAGTTAACTACATGATGAGCAAGGAATCTGTTAAGAAACGTATCGAAACAGGTATCTCTTACACTGAGTTCGCTTACCAAATTATGCAAGGTTACGACTTCTATGAACTCAATGCTAAATATGGCGTAACCCTACAAATTGGTGGTTCTGACCAATGGGGTAACATGACAGCAGGTACTGAGCTCTTGCGTCGTAAAGCGGACAAATCTGGACACGTAATCACAGTTCCACTTATCACAGATTCAACTGGTAAAAAATTCGGCAAATCTGAAGGCAACGCTGTCTGGCTTGACGCTACTAAGACAACTCCTTATGAAATGTACCAATTCTGGCTTAACGTTATGGACGATGATGCCGTTCGTTTCTTGAAAATTTTCACTTTCTTGTCACTTGAAGAAATCGAAGAAATCGGTAAAGAATTTGACCAAGCTCGTCACCAACGTTTAGCACAAAAGGTTCTGGCTCGCGAAGTTGTTACTTTGGTTCACGGTAAAGAAGCCTATGAACAAGCTGTTCACATCACCGAACAACTCTTCGCTGGTAACCTTAAAGCCCTCTCAGCACGTGACCTTAAAGTTGCCCTCAATGGTGTCCCAACCTATGAGATTTCAGCAGATGAAAATCTTAACATTGTTGAACTTCTCGTCAATGCTAAAATTTCACCATCTAAACGTCAAGCACGTGAAGACGTGCAAAACGGTGCTATCTATATCAACGGTGAACGCGTGCAAGACTTGGATTACACTCTTTCAGATACCGATAAGATTGACAATGAAATCACTGTTATCCGTCGCGGTAAGAAGAAAAACTTTGTTTTAACTTACTAA

Protein sequence:

MTIFEELKARGLIFQTTDEEALVKAFEEGPVSFYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKETVEGWVEKIQGQLSRFLDFENGDNKAVMVNNYDWFGSVSFIDFLRDVGKYFTVNYMMSKESVKKRIETGISYTEFAYQIMQGYDFYELNAKYGVTLQIGGSDQWGNMTAGTELLRRKADKSGHVITVPLITDSTGKKFGKSEGNAVWLDATKTTPYEMYQFWLNVMDDDAVRFLKIFTFLSLEEIEEIGKEFDQARHQRLAQKVLAREVVTLVHGKEAYEQAVHITEQLFAGNLKALSARDLKVALNGVPTYEISADENLNIVELLVNAKISPSKRQAREDVQNGAIYINGERVQDLDYTLSDTDKIDNEITVIRRGKKKNFVLTY

GenBank Info

locus_tag - FAM13496-i1-1.1_000879
inference - COORDINATES: similar to AA sequence:RefSeq:YP_003027899.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - Tyrosine--tRNA ligase 1
protein_id - extdb:FAM13496-i1-1.1_000879

Gene Locus

Located on scaffold FAM13496-i1-1_scf10

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM13496-i1-1.1_000878
FAM13496-i1-1.1_000880