OpenGenomeBrowser
Tools
TAXID 1308
ORGANISM FAM13496
GENOME FAM13496-i1-1.1
GENE FAM13496-i1-1.1_000951
locus tag:
FAM13496-i1-1.1_000951
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
Type
Name
Description
Pathways
KEGG reaction
R00378 deoxythymidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dTTP + DNA <=> Diphosphate + DNA
KEGG reaction
R00377 Deoxycytidine triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dCTP + DNA <=> Diphosphate + DNA
KEGG reaction
R00376 Deoxyguanosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dGTP + DNA <=> Diphosphate + DNA
KEGG reaction
R00375 Deoxyadenosine 5'-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed); dATP + DNA <=> Diphosphate + DNA
Gene Product
PolC-type DNA polymerase III
Ortholog
N0.HOG0003446 PolC-type DNA polymerase III
KEGG gene
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
kornec03030 kornec03430 kornec03440
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005575 cellular_component
Eggnog Protein
EP:polC
Eggnog Ortholog
EO:COG2176
Eggnog Description
ED:Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EC Number
EC:2.7.7.7 DNA-directed DNA polymerase; DNA polymerase I; DNA polymerase II; DNA polymerase III; DNA polymerase alpha; DNA polymerase beta; DNA polymerase gamma; DNA nucleotidyltransferase (DNA-directed); deoxyribonucleate nucleotidyltransferase; deoxynucleate polymerase; deoxyribonucleic acid duplicase; deoxyribonucleic acid polymerase; deoxyribonucleic duplicase; deoxyribonucleic polymerase; deoxyribonucleic polymerase I; DNA duplicase; DNA nucleotidyltransferase; DNA polymerase; DNA replicase; DNA-dependent DNA polymerase; duplicase; Klenow fragment; sequenase; Taq DNA polymerase; Taq Pol I; Tca DNA polymerase
Occurs in the following pathway maps:
Pathway
Description
kornec03030
DNA replication
kornec03430
Mismatch repair
kornec03440
Homologous recombination
Sequences
Nucleotide sequence (GC-content: 39.2 %):
A T G T C T G A T A A A T T T A A G C T T C T T T T A A A A C A A A T T C A T T T T C C A C A G C A T G A G G A A G C T T A T A A T G A A A T T A A A A G T G G T T C T A T T G A A T C A G T A A A G C T A T T T A A A T C A A A A C G T C A G T G G T T T T T T G T T T T T T C T T T C A G A A A T C T A C T G T C A T A T G A G A C T T T C A C T C T T T T T G A T A A T C T G C T T C A T T C T T C T T T T G A T T C T T T A G G G G C T A A A G T T T C A T A T A T G A T T A A T G T A G A A G A T A T T T C T T G T G A T C A A T C T T T A C T T G A A G C T T A T T T T T C A T A T G C T T T A G A T A T T T T A A A A T C A T C A C A C T T T T C A A T C T A T T C C C T A T T C T C C A A T T T G G G G A T T G A G A T T T C T A A T A A T A G T A T T T C T G T T A A G G C T C C T G C G C A T A T C C T T A G A G A G A A T T T A C A T G A G A G A T T T A T A G C C C T G A T T G C T G A T G T T C T T T C G A A T G T T G G T T T A T C T A A T G T T T C T A T T T C G G T T C T T G A G G A T A A A G A A G C T T C A T C C T C T C T T G A A G A G G C T T A C G A G A C A A A T A A G A T C T C C T T A C A A G A A G A G G C A G A A T C T C A A G C T A G A C A A G C A C T T C A A T C A A T T G T T C A A A G T T C G C C G G T A C C A C C A C C T C A G A A G C A T C A G G C C C A A A A T T T T G C T G A G A A A C A A A G T C A A C G A G T T G C A A G C T T T G A T A A G G C T G A G A T T A C T C C A A T G A T T G A A G T C A A T T C T G A A G A A A A T A G G A T T G T T T T T G A A G G A T A T A T T T T T G A T G T A G A G C A A C G T G A A A C G A A A A C A G G T A G G A T T A T A A T A A A T T T T A A G G T A A C T G A T T A T A C C T C T A G T T T T G C T A T G C A A C G T T G G G T G A A G G A T A G C G A A G A A C T T G T T A A G T T C G G T A T G A T T A A A A A A G G A A A C T G G G T A A G A G T T C G A G G T C G T A T T G A G A A T A A T C C T T T T A C A C A T A G T T T G A C T A T G A A C G T A C A A G A T A T T A A G G A A A T T T C T C A T A C T C C T C G T A A G G A T T T G A T G C C C G A G G G A C A G A A G C G A G T T G A A T T T C A T G C T C A T A C T A A C A T G T C A A C T A T G G A T G C T A T A C C A A C A G T T G A A G A G C T C A T C G A T A C A G C G G C T T T T T G G G G A C A T C C A G C A G T T G C G A T A A C A G A T C A T G C A A A T G T T C A A A G T T T T C C T C A T G G C T A C C A T A A A G C T A A G A A A G C T G G A A T T A A G G C G A T T T T T G G T C T T G A A G C C A A T C T T G T T G A G G A C A A A G T T C C T A T T G T T T A T A A T T C C G A A A A T T T G G A A T T A A A A G A A G C A A C T T A T G T T G T A T T C G A C G T A G A A A C A A C A G G T T T G T C T G C T G T T C A T A A T G A T T T G A T C C A G A T T G C G G C A T C A A A A A T G C A T A A A G G T A A T A T T G T T G A G C A A T T T G A T G A A T T C A T T G A T C C T G G A T A T C C G C T T T C T G C G T T T A C G A C T G A A T T G A C T G G T A T T A C T G A T A A T C A T G T T A A A G G T G C C A A A C C T T T A G T G C A A G T T T T A C A G G A G T T T C A A G A A T T C T G T A A A G G A G C T G T G C T A G T C G C C C A C A A T G C G A C C T T T G A C G T T G G G T T T A T G A A T G C C A A T T A T G A A A G A C A T C A G T T A C C G A C A A T C T C A C A A C C G G T T A T T G A T A C T T T A G A A T T T G C A C G G A A T C T T T A T C C T G A G T A T A A A C G T C A T G G T T T G G G T C C T T T G A C A A A G C G T T T T G G C G T T G C C T T G G A C C A C C A C C A C A T G G C C A A C T A T G A T G C G G A A G C A A C A G G T C G T T T G T T G T T T A T T T T C A T T A A A G A T G T A T T C G A A A A G C A T G G A T T G A C T A A T C T G G A A C A G T T G A A C A C A G A A T T G G T C T C T G A T G A T T C G T A T A A G A A G T C T C G T G T C A A A C A T G C G A C A C T A T A T G T T C A G A A T C A A A C G G G T T T G A A G A A T A T C T T T A A A T T G G T A A G C C T A T C A A A T G T A T C A T A T T T T G A G G G A G T A G C C C G T A T T C C T C G T A A G G T T T T A G A T G A G T A T C G T G A G G G A A T C A T A G T C G G T T C C G C A T G T G C A G A T G G T G A A G T T T T T G A T A C T C T C T T G T C T C A T G G T A T T G A T A A G G C A G T T G A A G T T G C T A A A T A C T A T G A T T T T A T T G A A G T T A T G C C A C C A G C G A T T T A T G C G C C A T T G A T T G C A A A G G A T T T A A T C A A G G A T G A G G G A G C T A T A G A A C A A C T T A T T A G G G A T T T G A T T G A A G T T G C T A A T C G T C T T G A C A A G C C T G T G C T T G C T A C G G G A A A T G T A C A T T A T A T C A A T C C T G A A G A T G C C A T T T A T C G T G A A A T C A T T G T T C G T G C T T T G G G A C A A G G A G C T A T G A T C A A T A G A C C A A T T G G T A A G G G G G A A A A C G C T C A A C C T G C T C C T C T A C C G G A A G C T C A T T T T A G A A C A A C C A A T G A G A T G C T A G A C G A A T T T G C C T T T T T G G G G A A A G A C T T A G C C T A T G A A A T T G T T G T A G C T A A T A C A C A A G C T A T G G C A A A T C A A A T C G A A G A G G T T G A A G T C G T C A A A A A A G A C T T G T A T A C A C C T T A T A T T G A T C G T G C A G A A G A A C A G G T T G C A G A G A T G A C T T A T G C T A A A G C A T T T G A G C T T T A T G G T A A T C C T T T G C C T G A T A T T A T T G A C T T G C G G A T T G A G A A A G A G T T G T C C T C A A T T C T T G G T A A T G G A T T T G C C G T A A T A T A T C T G G C A T C G C A G A T G C T G G T G A A C C G T T C A A A T G A A C G T G G C T A C C T G G T T G G C T C T C G G G G G T C T G T T G G C T C T A G T T T T G T T G C A A C A A T G A T T G G A A T T A C T G A G G T A A A T C C T A T G C C A C C T C A T T A T T T A T G T C C T A A A T G C C A A C A C T C A G A G T T T A T C A C G G A T G G T T C T T A T G G C T C T G G C T T T G A T T T G C C T G A T A A G G A G T G T T C A G A A T G T G G A A C T G A G T A T A A A A A A G A T G G T C A G G A T A T T C C T T T C G A G A C C T T C C T C G G T T T T G A T G G G G A T A A G G T T C C T G A T A T T G A T T T G A A C T T C T C A G G A G A T G A T C A G C C G T C G G C T C A C T T G G A T G T A C G T G A T A T T T T T G G A G A G C A A T A T G C C T T C C G T G C T G G A A C G G T A G G T A C T G T T G C A G A T C G G A C A G C T T A T G G T T T T G T C A A G G G T T A C G A A C G T G A T T A C A A T A A G T T C T A T C G T G A T G C T G A G G T T G A T C G T T T G G C T A T G G G T G T T G C T G G G G T T A A G C G A A A T A C A G G T C A G C A C C C A G G T G G T A T C G T T G T T A T T C C A A A T T A T A T G G A T G T C T A T G A T T T T A C A C C T G T T C A A T A T C C G G C T G A T G A T G T A A C T G C T G C T T G G C A G A C A A C T C A C T T T A A C T T C C A C G A T A T C G A T G A G A A C G T G T T G A A G C T A G A T A T T C T G G G A C A T G A T G A T C C G A C T A T G A T T C G T A A G T T A C A G G A C C T A T C A G G A A T T G A T C C A A A G G A T A T T C G A G C A G A T G A T C C G G A T G T G A T G A A A C T T T T T T C A G G G A C T G A G G T T T T A G G G G T A A C G C C T G A A C A A A T T G G G A C C T C A A C G G G C G T G T T G G G A A T C C C T G A G T T T G G G A C T A A C T T T G T T C G T G G T A T G G T C G A A G A G A C G C A T C C G A C G A C C T T T G C G G A A C T C T T A C A G T T A T C T G G T T T A T C C C A T G G T A C A G A T G T T T G G T T G G G T A A T G C A C A A G A T T T G A T T A A G G A A G G T A T T G C C A C C C T G A A A A C A G T T A T C G G T T G T C G T G A C G A T A T C A T G G T A T A C C T A A T G C A T G C A G G G T T A G A T C C T A A G A T G G C C T T T A C C A T T A T G G A A C G T G T G C G T A A G G G A A T G T G G T T G A A A A T T T C T G A A G A A G A G C G A A A T G G T T A T A T T C A A G C C A T G C G T G A A A A T A A T G T T C C G G A C T G G T A T A T T G A A T C T T G T G G T A A A A T C A A G T A C A T G T T C C C T A A A G C C C A T G C G G C T G C C T A C G T T A T G A T G G C C C T T C G C G T A G C T T A T T T C A A G G T G C A C C A T C C T A T T T A T T A C T A T T G T G C T T A C T T C T C G A T T C G A T C C A A A G C A T T T G A G C T T A A G A C G A T G T C T G C A G G G C T C G A T G C T G T T A A A G C T C G A A T G G A A G A T A T T A A G G A G A A G C G C C A A C G A A A T G A A G C T A C T A A T C T T G A A A A T G A C T T G T T T A C A A C G C T T G A A A T T G T C A A T G A A A T G T T A G A A C G T G G C T T T A C T T T T G G C C A G T T A G A T C T T T A T A A G A G T C A G G C G A C T G A A T T T T T G A T T G A A G G A G A T A C C T T G A T T C C T C C G T T T A T C G C A C T T G A A G G T T T G G G T G A A A A C G T T G C G A A G C A A T T G G T T G C T G C G C G T G A A G A A G G G G A A T T C C T C T C C A A A A C A G A A T T G C G T A A A C G A G G A G G C C T A T C A T C A A C C T T G G T T G A A A G A T T A G A T G A A A T G G G C A T T C T A G G A A A T A T G C C A G A A G A T A A T C A G T T A A G T C T T T T T G A T G A T T T C T T T T A A
Protein sequence:
M S D K F K L L L K Q I H F P Q H E E A Y N E I K S G S I E S V K L F K S K R Q W F F V F S F R N L L S Y E T F T L F D N L L H S S F D S L G A K V S Y M I N V E D I S C D Q S L L E A Y F S Y A L D I L K S S H F S I Y S L F S N L G I E I S N N S I S V K A P A H I L R E N L H E R F I A L I A D V L S N V G L S N V S I S V L E D K E A S S S L E E A Y E T N K I S L Q E E A E S Q A R Q A L Q S I V Q S S P V P P P Q K H Q A Q N F A E K Q S Q R V A S F D K A E I T P M I E V N S E E N R I V F E G Y I F D V E Q R E T K T G R I I I N F K V T D Y T S S F A M Q R W V K D S E E L V K F G M I K K G N W V R V R G R I E N N P F T H S L T M N V Q D I K E I S H T P R K D L M P E G Q K R V E F H A H T N M S T M D A I P T V E E L I D T A A F W G H P A V A I T D H A N V Q S F P H G Y H K A K K A G I K A I F G L E A N L V E D K V P I V Y N S E N L E L K E A T Y V V F D V E T T G L S A V H N D L I Q I A A S K M H K G N I V E Q F D E F I D P G Y P L S A F T T E L T G I T D N H V K G A K P L V Q V L Q E F Q E F C K G A V L V A H N A T F D V G F M N A N Y E R H Q L P T I S Q P V I D T L E F A R N L Y P E Y K R H G L G P L T K R F G V A L D H H H M A N Y D A E A T G R L L F I F I K D V F E K H G L T N L E Q L N T E L V S D D S Y K K S R V K H A T L Y V Q N Q T G L K N I F K L V S L S N V S Y F E G V A R I P R K V L D E Y R E G I I V G S A C A D G E V F D T L L S H G I D K A V E V A K Y Y D F I E V M P P A I Y A P L I A K D L I K D E G A I E Q L I R D L I E V A N R L D K P V L A T G N V H Y I N P E D A I Y R E I I V R A L G Q G A M I N R P I G K G E N A Q P A P L P E A H F R T T N E M L D E F A F L G K D L A Y E I V V A N T Q A M A N Q I E E V E V V K K D L Y T P Y I D R A E E Q V A E M T Y A K A F E L Y G N P L P D I I D L R I E K E L S S I L G N G F A V I Y L A S Q M L V N R S N E R G Y L V G S R G S V G S S F V A T M I G I T E V N P M P P H Y L C P K C Q H S E F I T D G S Y G S G F D L P D K E C S E C G T E Y K K D G Q D I P F E T F L G F D G D K V P D I D L N F S G D D Q P S A H L D V R D I F G E Q Y A F R A G T V G T V A D R T A Y G F V K G Y E R D Y N K F Y R D A E V D R L A M G V A G V K R N T G Q H P G G I V V I P N Y M D V Y D F T P V Q Y P A D D V T A A W Q T T H F N F H D I D E N V L K L D I L G H D D P T M I R K L Q D L S G I D P K D I R A D D P D V M K L F S G T E V L G V T P E Q I G T S T G V L G I P E F G T N F V R G M V E E T H P T T F A E L L Q L S G L S H G T D V W L G N A Q D L I K E G I A T L K T V I G C R D D I M V Y L M H A G L D P K M A F T I M E R V R K G M W L K I S E E E R N G Y I Q A M R E N N V P D W Y I E S C G K I K Y M F P K A H A A A Y V M M A L R V A Y F K V H H P I Y Y Y C A Y F S I R S K A F E L K T M S A G L D A V K A R M E D I K E K R Q R N E A T N L E N D L F T T L E I V N E M L E R G F T F G Q L D L Y K S Q A T E F L I E G D T L I P P F I A L E G L G E N V A K Q L V A A R E E G E F L S K T E L R K R G G L S S T L V E R L D E M G I L G N M P E D N Q L S L F D D F F
GenBank Info
locus_tag - FAM13496-i1-1.1_000951
Gene Locus
Located on scaffold FAM13496-i1-1_scf11
Cellular location
Responsible annotations:
SL-0229 :
GO:0005622
intracellular anatomical structure
SL-0086 :
GO:0005737
cytoplasm
FAM13496-i1-1.1_000950
