update range to 10000 bp
locus tag: FAM13496-i1-1.1_000970 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
KEGG reaction
 R03650 L-Cysteine:tRNA(Cys) ligase (AMP-forming); ATP + L-Cysteine + tRNA(Cys) <=> AMP + Diphosphate + L-Cysteinyl-tRNA(Cys) kornec00970
Ortholog
 N0.HOG0001286 cysteine--tRNA ligase
KEGG gene
 K01883 CARS, cysS; cysteinyl-tRNA synthetase [EC:6.1.1.16] kornec00970
Gene Ontology
 GO:2001065 mannan binding
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:1901265 nucleoside phosphate binding
Gene Ontology
 GO:0140101 catalytic activity, acting on a tRNA
Gene Ontology
 GO:0140098 catalytic activity, acting on RNA
Gene Ontology
 GO:0097367 carbohydrate derivative binding
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044267 -
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043604 amide biosynthetic process
Gene Ontology
 GO:0043603 cellular amide metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043168 anion binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0043043 peptide biosynthetic process
Gene Ontology
 GO:0043039 tRNA aminoacylation
Gene Ontology
 GO:0043038 amino acid activation
Gene Ontology
 GO:0036094 small molecule binding
Gene Ontology
 GO:0035639 purine ribonucleoside triphosphate binding
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0032559 adenyl ribonucleotide binding
Gene Ontology
 GO:0032555 purine ribonucleotide binding
Gene Ontology
 GO:0032553 ribonucleotide binding
Gene Ontology
 GO:0030554 adenyl nucleotide binding
Gene Ontology
 GO:0030247 polysaccharide binding
Gene Ontology
 GO:0030246 carbohydrate binding
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0017076 purine nucleotide binding
Gene Ontology
 GO:0016875 ligase activity, forming carbon-oxygen bonds
Gene Ontology
 GO:0016874 ligase activity
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009986 cell surface
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008144 obsolete drug binding
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006518 peptide metabolic process
Gene Ontology
 GO:0006423 cysteinyl-tRNA aminoacylation
Gene Ontology
 GO:0006418 tRNA aminoacylation for protein translation
Gene Ontology
 GO:0006412 translation
Gene Ontology
 GO:0006399 tRNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005524 ATP binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0004817 cysteine-tRNA ligase activity
Gene Ontology
 GO:0004812 aminoacyl-tRNA ligase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0001871 obsolete pattern binding
Gene Ontology
 GO:0000166 nucleotide binding
Eggnog Protein
 EP:cysS
Eggnog Ortholog
 EO:COG0215
Eggnog Description
 ED:Belongs to the class-I aminoacyl-tRNA synthetase family
EC Number
 EC:6.1.1.16 cysteine---tRNA ligase; cysteinyl-tRNA synthetase; cysteinyl-transferRNA synthetase; cysteinyl-transfer ribonucleate synthetase; cysteine translase kornec00970
Gene Product
 cysteine--tRNA ligase

Occurs in the following pathway maps:

Pathway Description
kornec00970 Aminoacyl-tRNA biosynthesis

Sequences

Nucleotide sequence (GC-content: 40.5 %):

GTGATAAAAATTTATGATACAATGACACGTTCGCTCCGTGATTTCGTACCTTTGACAGAGAACACTGTCAATATGTATGTTTGCGGACCAACCGTCTACAATTATATTCATATCGGAAATGCCCGTTCAACAGTAGCTTTTGATACCATTCGTCGTTATTTTGAGTATCGTGGTTACACTGTTAACTACATTTCTAACTTTACAGATGTAGATGATAAGATTATCAAGGCGGCCAATGAAGTTGGTATTTCGACCAAAGAATTATCAGACAAGTTTATCACAGCCTTTATGGAAGATACCGCACAACTTGGAATCAAACCAGCGACACAAAATCCTCGTGTTATTAACTACATGGATGAAATCATTGCATTTGTATCAATCTTGATTGATAAAGGTTTTGCTTATGTTTCTGAAGGTGATGTATACTTCCGAGTAACTAAGTCAAACAATTATGCTAAATTAGCCAACAAGACCTTGGAAGATCTTGAAATTGGTGCTAGCGGACGTACGGATGCTGAGACAGATCGTAAGGAAGATCCTCTGGATTTTGCCCTTTGGAAAGCTGCCAAAGAAGGAGAGATTTCTTGGGAAAGTCCTTGGGGACCTGGACGTCCAGGCTGGCACATCGAATGTTCTGTTATGGCAACTGAAATCCTTGGGGATACTATCGATATCCATGGTGGAGGTGTGGACCTTGAGTTCCCACACCATACTAATGAAATCGCACAATCAGAAGCCAAGACTGGTAAGACCTTTGCTAATTACTGGATGCATAACGGTTTTGTCAATGTGGACAATGAGAAAATGTCAAAATCCTTGGGTAACTTTGTGACTGTTCATGATATGCTTAAGACGGTTGATGGGCAAGTGCTTCGCTTCTTCCTAGCGACACAACAGTATCGTAAACCAATTAACTTTACCGAGAAAGCTATCCATGATGCTGAAGTCAATCTCAAGTATTTGAAAAATACGCACAGTCTACCACTAACAGAAGAGGTAAGCCAAGCCGAATTGCAAACTTATCTTGATGCTTTCCAGGCGGCTATGGATGATGACTTTAATACGGCAAATGGTGTGACTGTTCTGTTTGATATGGCTAAATGGATTAATTCAGGCAACTATGATGAAACTGTTAAAGATGCTTTTGAAAAAATTCTACAAGTCTTCGGTATTGTTTTCGAAGAAGAAACTCTTGATGAAGATATCGAAAAACTCATTGAAGAGCGTCAAGCAGCTCGTGCCAACAAGGACTTTGCGACAGCAGATCGTATTCGTGATGAGTTAGCTGCTCAAGGTATCAAACTTCTTGATACCAAGGAGGGCGTGAGGTGGACACGTGACTAA

Protein sequence:

MIKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGYTVNYISNFTDVDDKIIKAANEVGISTKELSDKFITAFMEDTAQLGIKPATQNPRVINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAETDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGVDLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQTYLDAFQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKILQVFGIVFEEETLDEDIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVRWTRD

GenBank Info

locus_tag - FAM13496-i1-1.1_000970
EC_number - 6.1.1.16
inference - COORDINATES: similar to AA sequence:RefSeq:NP_269918.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - cysteine--tRNA ligase
protein_id - extdb:FAM13496-i1-1.1_000970

Gene Locus

Located on scaffold FAM13496-i1-1_scf11

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
SL-0310: GO:0009986 cell surface
FAM13496-i1-1.1_000969
FAM13496-i1-1.1_000971