update range to 10000 bp
locus tag: FAM13496-i1-1.1_000971 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0003488 Mini-ribonuclease 3
Gene Product
 Mini-ribonuclease 3
KEGG gene
 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140098 catalytic activity, acting on RNA
Gene Ontology
 GO:0090501 RNA phosphodiester bond hydrolysis
Gene Ontology
 GO:0090305 nucleic acid phosphodiester bond hydrolysis
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0044085 cellular component biogenesis
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042254 ribosome biogenesis
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0034470 ncRNA processing
Gene Ontology
 GO:0022613 ribonucleoprotein complex biogenesis
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016072 rRNA metabolic process
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006396 RNA processing
Gene Ontology
 GO:0006364 rRNA processing
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0004540 ribonuclease activity
Gene Ontology
 GO:0004518 nuclease activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:mrnC
Eggnog Ortholog
 EO:COG1939
Eggnog Description
 ED:Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)

Sequences

Nucleotide sequence (GC-content: 40.3 %):

GTGACTAAACACATTGATGTAAATCTTATTAATGGTATTGCACTCGCCTTTGAGGGAGATGCTGTTTATTCCTTATACATTCGCCGTCACCTGATTTTTCAAGGACAGACTAAGCCAAATCAATTGCATCGTCTAGCTACATGCTATGTTTCCGCCAAGGCTCAAGCTAGCCTCATTGAAAAAATGCTAGAGCGAGAGCTTTTGACTGAAAAAGAGCTGGACATCTACAAACGAGGTCGTAATGCTAAGAGTCATACCAAAGCTAAAAATACGGATGTTATTACCTATAAAATGTCAACAGGCTTCGAGGCAGTCATGGGTTATCTTCATATGACCGAGGATATCGACCGTCTAGAAGAGTTGGTTGCTTGGTGCATTGATGAAGTTGAAAAAGAAATCTAA

Protein sequence:

MTKHIDVNLINGIALAFEGDAVYSLYIRRHLIFQGQTKPNQLHRLATCYVSAKAQASLIEKMLERELLTEKELDIYKRGRNAKSHTKAKNTDVITYKMSTGFEAVMGYLHMTEDIDRLEELVAWCIDEVEKEI

GenBank Info

locus_tag - FAM13496-i1-1.1_000971
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011680620.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - Mini-ribonuclease 3
protein_id - extdb:FAM13496-i1-1.1_000971

Gene Locus

Located on scaffold FAM13496-i1-1_scf11

FAM13496-i1-1.1_000970
FAM13496-i1-1.1_000972