Annotations

Type Name Description Pathways
Gene Code
rsfS
Gene Product
ribosome silencing factor
Ortholog
N0.HOG0001407 ribosome silencing factor
KEGG gene
K09710 ybeB; ribosome-associated protein
Gene Ontology
GO:2000113 negative regulation of cellular macromolecule biosynthetic process
Gene Ontology
GO:2000112 regulation of cellular macromolecule biosynthetic process
Gene Ontology
GO:0090071 negative regulation of ribosome biogenesis
Gene Ontology
GO:0090069 regulation of ribosome biogenesis
Gene Ontology
GO:0080090 regulation of primary metabolic process
Gene Ontology
GO:0065007 biological regulation
Gene Ontology
GO:0060255 regulation of macromolecule metabolic process
Gene Ontology
GO:0051248 negative regulation of protein metabolic process
Gene Ontology
GO:0051246 regulation of protein metabolic process
Gene Ontology
GO:0051172 negative regulation of nitrogen compound metabolic process
Gene Ontology
GO:0051171 regulation of nitrogen compound metabolic process
Gene Ontology
GO:0050794 regulation of cellular process
Gene Ontology
GO:0050789 regulation of biological process
Gene Ontology
GO:0048523 negative regulation of cellular process
Gene Ontology
GO:0048519 negative regulation of biological process
Gene Ontology
GO:0044877 protein-containing complex binding
Gene Ontology
GO:0044087 regulation of cellular component biogenesis
Gene Ontology
GO:0043023 ribosomal large subunit binding
Gene Ontology
GO:0043021 ribonucleoprotein complex binding
Gene Ontology
GO:0034249 negative regulation of cellular amide metabolic process
Gene Ontology
GO:0034248 regulation of cellular amide metabolic process
Gene Ontology
GO:0032269 -
Gene Ontology
GO:0032268 regulation of cellular protein metabolic process
Gene Ontology
GO:0031327 negative regulation of cellular biosynthetic process
Gene Ontology
GO:0031326 regulation of cellular biosynthetic process
Gene Ontology
GO:0031324 negative regulation of cellular metabolic process
Gene Ontology
GO:0031323 regulation of cellular metabolic process
Gene Ontology
GO:0019222 regulation of metabolic process
Gene Ontology
GO:0017148 negative regulation of translation
Gene Ontology
GO:0010629 negative regulation of gene expression
Gene Ontology
GO:0010608 post-transcriptional regulation of gene expression
Gene Ontology
GO:0010605 negative regulation of macromolecule metabolic process
Gene Ontology
GO:0010558 negative regulation of macromolecule biosynthetic process
Gene Ontology
GO:0010556 regulation of macromolecule biosynthetic process
Gene Ontology
GO:0010468 regulation of gene expression
Gene Ontology
GO:0009892 negative regulation of metabolic process
Gene Ontology
GO:0009890 negative regulation of biosynthetic process
Gene Ontology
GO:0009889 regulation of biosynthetic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0006417 regulation of translation
Gene Ontology
GO:0005488 binding
Gene Ontology
GO:0003674 molecular_function
Eggnog Protein
EP:rsfS
Eggnog Ortholog
EO:COG0799
Eggnog Description
ED:Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN)

Sequences

Nucleotide sequence (GC-content: 41.8 %):

TTGACTAAAGAAGAATTACTTGAATTGGTTGTCAAAGCTGCTGATGAAAAGCGAGCTGAAGACATCGTTGCCCTAGATTTGTATGGTCTTACTAGCCTAACAGATTACTTTGTTATTTTGAGTGCAATGAATAGCCGTCAGTTGGAAGCTATTGCCGACAACATCCGTGAGAAAGTTAAAGAAGCTGGTGTGGACGCTAGTCACATGGAAGGTGACAATAAGGGAGGCTGGATTCTTTTGGATCTTAACGACGTCGTTGTTCACATCTTTACAGAAGATGAGCGTGCACACTATAACCTCGAAAAACTCTGGCATGAAGCACTAATGGTAGATGTGTCAGCCTATTTGGCATAA

Protein sequence:

MTKEELLELVVKAADEKRAEDIVALDLYGLTSLTDYFVILSAMNSRQLEAIADNIREKVKEAGVDASHMEGDNKGGWILLDLNDVVVHIFTEDERAHYNLEKLWHEALMVDVSAYLA

GenBank Info

gene - rsfS
locus_tag - FAM13496-i1-1.1_001010
inference - COORDINATES: similar to AA sequence:RefSeq:NP_722116.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ribosome silencing factor
protein_id - extdb:FAM13496-i1-1.1_001010

Gene Locus

Located on scaffold FAM13496-i1-1_scf12


FAM13496-i1-1.1_001009
FAM13496-i1-1.1_001011