update range to 10000 bp
locus tag: FAM13496-i1-1.1_001026 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001470 isochorismatase family protein
KEGG gene
 K16788 niaX; niacin transporter
Gene Ontology
 GO:1901575 organic substance catabolic process
Gene Ontology
 GO:1901565 organonitrogen compound catabolic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901361 organic cyclic compound catabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0072529 pyrimidine-containing compound catabolic process
Gene Ontology
 GO:0072527 pyrimidine-containing compound metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0055086 nucleobase-containing small molecule metabolic process
Gene Ontology
 GO:0046700 heterocycle catabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0046113 nucleobase catabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044270 cellular nitrogen compound catabolic process
Gene Ontology
 GO:0044248 cellular catabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0042737 -
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0019860 uracil metabolic process
Gene Ontology
 GO:0017144 -
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009112 nucleobase metabolic process
Gene Ontology
 GO:0009056 catabolic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006212 uracil catabolic process
Gene Ontology
 GO:0006208 pyrimidine nucleobase catabolic process
Gene Ontology
 GO:0006206 pyrimidine nucleobase metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:pncA
Eggnog Ortholog
 EO:COG1335
Eggnog Description
 ED:isochorismatase
Gene Product
 cysteine hydrolase

Sequences

Nucleotide sequence (GC-content: 42.8 %):

ATGACAAAAGCATTGATTTCAATTGATTACTCTTATGACTTTGTAGCAGATGATGGGAAGTTGACGGCTGGTAAGCCTGCCCAAGCCATTGAAGATCGCATTGCTCAGGTAACGCAAGAAGCCTATGACAATGGAGATTATATCTTTGTGGCTATGGACCGACATGATGAGGGGGATACTTTCCATCCTGAGACTAAACTCTTTCCGCCTCACAATATTGCAGGGACAGCTGGGCGAGAACTTTATGGTAAGTTGGCTGGTGTATATGATGCCATCAAGGATGATCATCGTGTCTTTTGGATGGACAAACGTCACTATTCAGCTTTTTCAGGAACAGATTTGGATATTCGTTTGCGTGAGCGTCGTGTGACAACAGTCGTTTTGACGGGAGTTTTAACAGATATTTGTGTGTTACATACGGCTATTGATGCTTATAATTTGGGCTATGATATCGAGGTGGTAGAGAGTGCAACAGCCTCCTTGACGACAGAAGCACATGATTTTGCCATTGGGCATTTTAAAAATGTTCTTGGAGCGACAATTGTAGAGTAA

Protein sequence:

MTKALISIDYSYDFVADDGKLTAGKPAQAIEDRIAQVTQEAYDNGDYIFVAMDRHDEGDTFHPETKLFPPHNIAGTAGRELYGKLAGVYDAIKDDHRVFWMDKRHYSAFSGTDLDIRLRERRVTTVVLTGVLTDICVLHTAIDAYNLGYDIEVVESATASLTTEAHDFAIGHFKNVLGATIVE

GenBank Info

locus_tag - FAM13496-i1-1.1_001026
inference - COORDINATES: similar to AA sequence:RefSeq:NP_722142.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - cysteine hydrolase
protein_id - extdb:FAM13496-i1-1.1_001026

Gene Locus

Located on scaffold FAM13496-i1-1_scf12

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM13496-i1-1.1_001025
FAM13496-i1-1.1_001027