update range to 10000 bp
locus tag: FAM13496-i1-1.1_001085 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 response regulator transcription factor
Ortholog
 N0.HOG0000074 response regulator transcription factor
KEGG gene
 K20488 nisR, spaR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR kornec02020kornec02024
Eggnog Protein
 EP:spaR
Eggnog Ortholog
 EO:COG0745
Eggnog Description
 ED:Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Occurs in the following pathway maps:

Pathway Description
kornec02020 Two-component system
kornec02024 Quorum sensing

Sequences

Nucleotide sequence (GC-content: 40.2 %):

ATGGCTCGAATACTTGTTATTGATGATCAAAAAGATATTGTTCAATTGGTTGTAAAGGCTTTAGAGCTCCAAAACCATAATGTGACAGGGCTTACAAGTGTTTTAGATTTGGATAAGAACTCTTTACCTCGATTTGACCTGATTTTACTGGATATTATGATGCCTGATGTTGACGGTCTACAGTTTTGCCATGAGATTCGAAATCAGGTGGATTGCCCAATCCTCTTTATTACAGCTAAAACGCAAGAAGCAGACATTGTCCAAGGGTTGAGTTATGGTGCGGATGATTACATTTGCAAACCATTTGGAGTTAAAGAACTCCAAGCGCGTGTTGCAGCTCACTTGAGACGTGAACATCGTGAGCGTCACCATAAGCTTTCACTTGGGGAGTTTCAGTTTGACTTGTCTGCTCAAGAGCTTTATATTGAGAATCAGTTGTTAGATTTGACAAAGTCGGAATATGGTATTTGCCAGTTTTTAGCTGAAAATAAGGGCCAAGTCTTTTCAAAAGAACAAATCTACACGCATTTGTACGGCTATGAGGATAAAGGCAGTCCGGCAGCAGTGGCTGAACATATCAAGAATATCCGTGCAAAGCTTAAAGAAGTTGGGCAAAATCCTATTGAAACAGTTTGGGGGATTGGTTACAAGTGGCACTAA

Protein sequence:

MARILVIDDQKDIVQLVVKALELQNHNVTGLTSVLDLDKNSLPRFDLILLDIMMPDVDGLQFCHEIRNQVDCPILFITAKTQEADIVQGLSYGADDYICKPFGVKELQARVAAHLRREHRERHHKLSLGEFQFDLSAQELYIENQLLDLTKSEYGICQFLAENKGQVFSKEQIYTHLYGYEDKGSPAAVAEHIKNIRAKLKEVGQNPIETVWGIGYKWH

GenBank Info

locus_tag - FAM13496-i1-1.1_001085
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014621525.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - response regulator transcription factor
protein_id - extdb:FAM13496-i1-1.1_001085

Gene Locus

Located on scaffold FAM13496-i1-1_scf13

FAM13496-i1-1.1_001084
FAM13496-i1-1.1_001086