update range to 10000 bp
locus tag: FAM13496-i1-1.1_001095 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 signal recognition particle protein
Ortholog
 N0.HOG0001413 signal recognition particle protein
KEGG gene
 K03106 SRP54, ffh; signal recognition particle subunit SRP54 [EC:3.6.5.4] kornec02024kornec03060kornec03070
Eggnog Protein
 EP:ffh
Eggnog Ortholog
 EO:COG0541
Eggnog Description
 ED:Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EC Number
 EC:3.6.5.4 signal-recognition-particle GTPase

Occurs in the following pathway maps:

Pathway Description
kornec02024 Quorum sensing
kornec03060 Protein export
kornec03070 Bacterial secretion system

Sequences

Nucleotide sequence (GC-content: 40.1 %):

ATGGCTTTTGAAAGCTTAACGGAACGCTTGCAAGGCGTTTTCAAAAATTTAAGACGTAAAGGAAAACTTTCAGAGAAAGAAGTTCAAGAAGTCACTAAAGAGATTCGTTTGGCACTTCTTGAAGCAGACGTAGCTCTACCAGTTGTTAAGACATTTATCAAACGTGTTCGTGAACGTGCTGTAGGTCACGAAATCATTGATACTCTTGATGCTTCACAACAAATCATTAAGATTGTTAATGAAGAATTGACAGAAATTCTTGGGTCTGAAACATCTGAGATTGAGAAATCTCCAAAGATTCCAACTATCATTATGATGGTTGGTCTTCAAGGGGCTGGTAAAACAACCTTTGCAGGTAAATTGGCTAATAAACTGATTAAAGAACAAGAAGCTCGTCCAATGATGATTGCTGCAGATATCTATCGTCCAGCAGCCATTGATCAGTTGAAAACTTTGGGACAACAAATCAATGTTCCTGTTTTTGATATGGGAACAGAGACACCAGCAGTTGAGATCGTCAGAAATGGTTTGGAACAAGCGCGTGCTAATAAAAATGACTATGTCTTGATTGATACGGCTGGTCGTTTGCAGATTGACGAAACCCTCATGAAAGAGTTGCGTGATATCAAAGATTTTGCTCATCCAAACGAGATTCTCTTGGTTGTAGATAGCATGATTGGTCAGGAAGCTGCTAACGTTGCCAAGGAGTTTAATGAACAACTAGATATCACAGGTGTCGTTCTTACTAAAATTGATGGTGATACACGTGGTGGTGCGGCTCTTTCAATTCGTGAGATCACTGGTAAGCCGATTAAATTTACAGGTACTGGTGAGAAAATTACGGATATCGAGACTTTCCACCCAGACCGTATGTCAAGCCGTATCTTAGGTATGGGTGACCTTCTTACCCTTATTGAAAAAGCTTCTCAGGAGTATGATGAGAAAAAATCTCTTGAGTTAGCTGAGAAGATGCGTGAAAACACCTTTGATTTCAATGATTTTATCGACCAATTAGACCAAGTGCAAAATATGGGTCCTATGGAGGATTTACTAAAGATGTTGCCAGGTATGGCTAACAATCCAGCCTTGGCTAATGTTAAAGTAGACGAAAAGCAGATTGCTCGCAAGCGTGCCATTGTATTATCAATGACACCAGAAGAACGTGAAAATCCAGATCTCTTGACTCCAAGTCGTCGTCGCCGTATTGCCAATGGTTCAGGGAATACCTTCATCGAAGTAAACAAGTTTATTAAAGACTTCAATCAAGCAAAACAAATGATGCAAGGCGTTATGTCTGGCGATATGGAGCAAATGATGCGTCAAATGGGTCTTAACCCAAATAATCTGTCCAAAAACATGCCAAATATGCCTGATATGGGGAATATGGACATGTCTGCTCTTGAAGGCATGATGGGTGGCACTGGTATGCCAGATCTTGCAAATATGGATCTAAGCCAAATGCTTGGTGGTGGTCTTAAAGGTAAGGTCGGTTCATTTGCCATGAAACATATGATGAAGCGTCAAGCTAACAAGATGAAGAAAGCTAAGAAAAAACGTAAATAA

Protein sequence:

MAFESLTERLQGVFKNLRRKGKLSEKEVQEVTKEIRLALLEADVALPVVKTFIKRVRERAVGHEIIDTLDASQQIIKIVNEELTEILGSETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEQEARPMMIAADIYRPAAIDQLKTLGQQINVPVFDMGTETPAVEIVRNGLEQARANKNDYVLIDTAGRLQIDETLMKELRDIKDFAHPNEILLVVDSMIGQEAANVAKEFNEQLDITGVVLTKIDGDTRGGAALSIREITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQEYDEKKSLELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMANNPALANVKVDEKQIARKRAIVLSMTPEERENPDLLTPSRRRRIANGSGNTFIEVNKFIKDFNQAKQMMQGVMSGDMEQMMRQMGLNPNNLSKNMPNMPDMGNMDMSALEGMMGGTGMPDLANMDLSQMLGGGLKGKVGSFAMKHMMKRQANKMKKAKKKRK

GenBank Info

locus_tag - FAM13496-i1-1.1_001095
inference - COORDINATES: similar to AA sequence:RefSeq:NP_687993.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - signal recognition particle protein
protein_id - extdb:FAM13496-i1-1.1_001095

Gene Locus

Located on scaffold FAM13496-i1-1_scf13

FAM13496-i1-1.1_001094
FAM13496-i1-1.1_001096