locus tag:
FAM13496-i1-1.1_001100
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
restriction endonuclease |
|
|
|
Ortholog
|
N0.HOG0005358 |
restriction endonuclease |
|
|
KEGG gene
|
K01156 |
res; type III restriction enzyme [EC:3.1.21.5] |
|
|
Eggnog Protein
|
EP:sthIR |
|
|
|
Eggnog Ortholog
|
EO:COG3421 |
|
|
|
Eggnog Description
|
ED:Type III restriction |
|
|
|
EC Number
|
EC:3.1.21.5 |
type III site-specific deoxyribonuclease; type III restriction enzyme; restriction-modification system |
|
Sequences
Nucleotide sequence (GC-content: 41.5 %):
ATGGCAAAAGCAAAGAAAATACCTGCTAACGCTCGTCAATTTCCTCTTGTGGATCAGGCTGAACAAGCTGAAAATGATTTGTTCAGTCAGCACCAAAGTTATGAAATCCCAAAGTATATTAAGGGGAACTTGATTCATACGTTGCGTACCTATCAGGATAAAGCTATCCGAAATTATCACTATACCCAAACAGAGATTAAACCGAACCCTCAACATGTGCTTTTTAACATGGCGACAGGTTCAGGGAAAACCGACTTGATGGCAGGGCTTATCCTCTACCTTTATCAAGAGCATGGCTATCGCAACTTCTTGTTTACCGTCAATACCAACTCAGTCTTGATGAAAACAAAGGACAACTTGGTCAACGAAAACAGTGAAAAATACCTGTTCAAAGACAAAATTGAAATCGACGGCAAGCATATTTTCATTAAGCAAGTCGAACGTTTCCCACGGATTCAACAAGACAACACCATTTACATTAAGCTATCTTCGGTTCAAAAAGTATCGGATGACCTGTTTGTCTTGAAAGAAAATACCATGGGGCTTTCAGACTATGAAAACCAACCTGTTGCAGTCTTAGCGGATGAAGCACACCATTATTCCGCAAGCACCAAGTCTGAAAAGGAAGCTGAAAATACTTGGGAATCAGCCATTAACAAAATCTTGCGTGCCCGTGATGATAAGGAACAAAAGAATCTCCTCCTTGAATTTACGGCAACAGTCGATTTTGATAAGGACGTCATCTATAACAAGTATCGGGATAAGGTGGTCTACCGCTATCCGTTGAATCAATTCATGTTTGATGGCTATTCCAAGCAGGTTAAGCGAATTGAAACGTCCGCAAGCGACCAAGATAAAATGCTAAACGCGGTCTTGCTTTCGCAGTTTAGAAAATACTGTGCTTATGCCGAGGGTGTCACAGGAACATTTAAGCCCGTGATTATGTTTAAGTCCGCAAAAGTTGCGGTATCACTGGAAGCCAACAAGGTCTTTAATGAGCTGATTCAAAATCTCAACGTTACGGATTTGCTCGCATTTATCAAGCGCCAACAAGTCCTAGATAGCAACGACAGCTCAGCTTTGGAACTGGCTTACAATTACTATCTCAAAAATGAAGATGACCTTGCAAAAATCGTCCGTGAGATTAAGCAAGACTTTGACCCGAGAAACGTGTTAAATGCTAATGACACAAGCGGAAATATGCTTGAAAAGGGGCAGTATGAGGCACTCAACACGCTCGAAAGCCCAAACAACCTCTATCGTGTGGTTTTTGCGGTCGCAAAACTGACCGAGGGATGGGATGTTCTCAACCTCTATGATATTGTCCGTATTGAGCAGGAAGCTGCGACAAACAAAAATGCCACAATGGTTGAAGCGCAACTCATTGGGCGTGGTGCAAGGTATTATCCATTTGAATTGGACGGTGTGAAAAGCTATCAACGTAGATTTGATAACGACACCTCAAACAAGCAATTGTTCCTAGAAACGTTGCACTACCACACCATGAATGAGCCACAATATCTTAAACAGCTTGTAGGCTCATTGAAGCAAATGGACTTGCCAACGGGTCAGGACAAGAAAAATCCACCGATTGAAATCAAGGTCAAGCCTGCTTTCAAAAAAACAGAAACCTATAAGACAGGAAAAATCTATTATAACGAAGCTGAGGATGTGGCAGATGATTGGTTTGATTCCATTCAGAAATACGGAATCACACACAAGACCGATATTCAAAGAAGTTTGAATTATGGTACTCGTGAGGTGTCTTATCAAGCAACAGTCGCATTGACTGAGACAAAACAAATCCATGTTGATAGGTTTGATGACCGCTATATTAAGAAAGCCATTCACCGCCTTGAGTTTTATCAATTTGACAACTTGAAAAAGTATCTGCCATTGCTTGAATCCATGAAAGAGTTCATCTATGGGGAAAACTGGCTAAACGCAAGTAAGTTGAAACTTTTCTTGACCGTTCCAAAAGAATACAAGTCAACAGATATTACGGCAGACGAGATTTTGAAAGTCACCATTGACCTTTTGAAAGAGTACGAAGTCAAATTCAAGTCTGGCTATGTCAAGAAACGAGGCACAAACAGGTTTGTTGGCTACCCAATTAGTGAGTATCTAACCAACTATAATAAGCGAGTACCTGAGTATGACACGGCAAACCTCTTGAATGAAGCCACTCAAAAAGTTGCAGTTTACGATATAGCTGAGGACTTCTATGTCTATGACCGTGCTATCGTCAACAAGTTGGAATTTGACCTCATCACACGTATTCAAGCTCATGTGAATGAGCTAAAAGCCAAATATAACAAGGCAGTTTACTTGTTCCGCATGGACGAGAATATGCACCGTGAGTCAGCTAAGAGCGAAAAGCTCAAGCTCCATCAATATGGCTCACGGATCAATCGAGCTGGCGAAATTGTAGATATGCACTTGCAGGGCTTCCAACCCGACTTCATCTTGTTCCTTGAAGATAGTGACTTTTGCTTCCAAATATTCATTGAACCAAAAGGCATGAGTGGCGATAGATTCGTCAGCGAGCTATGGAAGCAGGACTTGTTGCTCTATATGACCGACCATCAAGCAGAGATGGAATTTGAAGATGGTGTCGATAACGTCAAGATTAGCGGTCTGAAATTCTTTACCGCAAAAGACGGACAAAACACAATCCCTGAATTGATGGCAATGTCTGGCGTGACCTATCAGAAACCTAATGAACAGATAGATTTATTGATGGTAGCAGACCCTTCTACTGATGTAATAATCGAGGAGGATGAGTGA
Protein sequence:
MAKAKKIPANARQFPLVDQAEQAENDLFSQHQSYEIPKYIKGNLIHTLRTYQDKAIRNYHYTQTEIKPNPQHVLFNMATGSGKTDLMAGLILYLYQEHGYRNFLFTVNTNSVLMKTKDNLVNENSEKYLFKDKIEIDGKHIFIKQVERFPRIQQDNTIYIKLSSVQKVSDDLFVLKENTMGLSDYENQPVAVLADEAHHYSASTKSEKEAENTWESAINKILRARDDKEQKNLLLEFTATVDFDKDVIYNKYRDKVVYRYPLNQFMFDGYSKQVKRIETSASDQDKMLNAVLLSQFRKYCAYAEGVTGTFKPVIMFKSAKVAVSLEANKVFNELIQNLNVTDLLAFIKRQQVLDSNDSSALELAYNYYLKNEDDLAKIVREIKQDFDPRNVLNANDTSGNMLEKGQYEALNTLESPNNLYRVVFAVAKLTEGWDVLNLYDIVRIEQEAATNKNATMVEAQLIGRGARYYPFELDGVKSYQRRFDNDTSNKQLFLETLHYHTMNEPQYLKQLVGSLKQMDLPTGQDKKNPPIEIKVKPAFKKTETYKTGKIYYNEAEDVADDWFDSIQKYGITHKTDIQRSLNYGTREVSYQATVALTETKQIHVDRFDDRYIKKAIHRLEFYQFDNLKKYLPLLESMKEFIYGENWLNASKLKLFLTVPKEYKSTDITADEILKVTIDLLKEYEVKFKSGYVKKRGTNRFVGYPISEYLTNYNKRVPEYDTANLLNEATQKVAVYDIAEDFYVYDRAIVNKLEFDLITRIQAHVNELKAKYNKAVYLFRMDENMHRESAKSEKLKLHQYGSRINRAGEIVDMHLQGFQPDFILFLEDSDFCFQIFIEPKGMSGDRFVSELWKQDLLLYMTDHQAEMEFEDGVDNVKISGLKFFTAKDGQNTIPELMAMSGVTYQKPNEQIDLLMVADPSTDVIIEEDE
GenBank Info
locus_tag - FAM13496-i1-1.1_001100
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014294511.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - restriction endonuclease
protein_id - extdb:FAM13496-i1-1.1_001100
Gene Locus
Located on scaffold FAM13496-i1-1_scf13
FAM13496-i1-1.1_001099
