update range to 10000 bp
locus tag: FAM13496-i1-1.1_001192 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 tryptophan synthase subunit alpha
KEGG reaction
 R02722 L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]; L-Serine + Indoleglycerol phosphate <=> L-Tryptophan + D-Glyceraldehyde 3-phosphate + H2O kornec00260kornec00400kornec01100kornec01110kornec01230
KEGG reaction
 R02340 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase; Indoleglycerol phosphate <=> Indole + D-Glyceraldehyde 3-phosphate kornec00400kornec00402kornec01100kornec01110
KEGG reaction
 R00674 L-serine hydro-lyase (adding indole; L-tryptophan-forming); L-Serine + Indole <=> L-Tryptophan + H2O kornec00400kornec01100kornec01110
Ortholog
 N0.HOG0001726 tryptophan synthase subunit alpha
KEGG gene
 K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] kornec00260kornec00400kornec01100kornec01110kornec01230
Eggnog Protein
 EP:trpA
Eggnog Ortholog
 EO:COG0159
Eggnog Description
 ED:The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
EC Number
 EC:4.2.1.20 tryptophan synthase; L-tryptophan synthetase; indoleglycerol phosphate aldolase; tryptophan desmolase; tryptophan synthetase; L-serine hydro-lyase (adding indoleglycerol-phosphate); L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate, L-tryptophan and glyceraldehyde-3-phosphate-forming] kornec00260kornec00400kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00260 Glycine, serine and threonine metabolism
kornec00400 Phenylalanine, tyrosine and tryptophan biosynthesis
kornec00402 Benzoxazinoid biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 42.1 %):

ATGACAAAAACACTAACAAAACATCTACAAGCTATCAAAGACAGTAAACGCGGTATTTTCGTGCCCTATATCATGGCTGGTGACCACGCTAAAGGTCTAGACGGACTCTTTGAGACTATTACTCTCTTAGAAAATAGCGGTGTTTCAGCTATCGAGGTGGGTATTCCATGGTCTGACCCAGTGGCTGATGGTCCCATTATTGAACTAGCAGGACAACGTAGTTTGGCTAAAGACGTGACTTTAACAGCTATCATCAAGAAGCTTCAAGAAAAAAAGACACAGGTGCCTTTGGTTATCATGACCTACATCAACCCAGTTTATCAGTATGGTATTGAAGCCTTTGTCAAAGATTTAGCAGAGACTTCTGTCAAGGGGCTCATCATTCCTGATTTGCCAAATGAACATGCTGACTTTATCACTCCTTATTTGAGAGACAGTGACATTGCTCTCGTGCCTTTGGTCAGCTTGACTACAGGCATTGATCGTCAGAAACAGTTGATTGATGGTGCAGAAGGCTTTATCTACGCCGTTGCCATCAATGGTGTTACTGGTAAGACTGGTAATTACCGTGATGACCTTGATAAACACTTATCTAACTTGACTGCCTATGCAGACATTCCAGTTCTCACAGGTTTTGGTGTGTCAACAGAGGAAGACATTAAACGCTTTAATGCTGTGTCAGACGGTGTTATCGTGGGATCAAAAATTGTCCGTGACCTGCACGACGGTAAGGAAGAAGAAGTCGCTGAATTTGTTACATTAGGTTCACATTTTGAAAAATAG

Protein sequence:

MTKTLTKHLQAIKDSKRGIFVPYIMAGDHAKGLDGLFETITLLENSGVSAIEVGIPWSDPVADGPIIELAGQRSLAKDVTLTAIIKKLQEKKTQVPLVIMTYINPVYQYGIEAFVKDLAETSVKGLIIPDLPNEHADFITPYLRDSDIALVPLVSLTTGIDRQKQLIDGAEGFIYAVAINGVTGKTGNYRDDLDKHLSNLTAYADIPVLTGFGVSTEEDIKRFNAVSDGVIVGSKIVRDLHDGKEEEVAEFVTLGSHFEK

GenBank Info

locus_tag - FAM13496-i1-1.1_001192
EC_number - 4.2.1.20
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002951616.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - tryptophan synthase subunit alpha
protein_id - extdb:FAM13496-i1-1.1_001192

Gene Locus

Located on scaffold FAM13496-i1-1_scf15

FAM13496-i1-1.1_001191
FAM13496-i1-1.1_001193