update range to 10000 bp
locus tag: FAM13496-i1-1.1_001195 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Code
 trpC
KEGG reaction
 R03508 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase(cyclizing); 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate <=> Indoleglycerol phosphate + CO2 + H2O kornec00400kornec01100kornec01110kornec01230
Ortholog
 N0.HOG0001806 indole-3-glycerol phosphate synthase TrpC
KEGG gene
 K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] kornec00400kornec01100kornec01110kornec01230
Gene Product
 indole-3-glycerol phosphate synthase TrpC
Gene Ontology
 GO:0016831 carboxy-lyase activity
Gene Ontology
 GO:0016830 carbon-carbon lyase activity
Gene Ontology
 GO:0016829 lyase activity
Gene Ontology
 GO:0004425 indole-3-glycerol-phosphate synthase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:trpC
Eggnog Ortholog
 EO:COG0134
Eggnog Description
 ED:Belongs to the TrpC family
EC Number
 EC:4.1.1.48 indole-3-glycerol-phosphate synthase; indoleglycerol phosphate synthetase; indoleglycerol phosphate synthase; indole-3-glycerophosphate synthase; 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase (cyclizing) kornec00400kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00400 Phenylalanine, tyrosine and tryptophan biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 41.7 %):

ATGAGTAAAGCTTTTCTTCCAACAATCCTAGAACAAAAAGAAAAAGAAGTGGCCCAGTTGGTCATGGAAGACTTACAGCCCTTGCGTCAGACCTATCGCCTTTATGATTTTCTCAAGTCAAATCAAAACAAGTTGCAAATTATTTCTGAAGTGAAGAAAGCCAGTCCAAGTATGGGTGATATTAACCTAGATGTGGATATTGTAGCTCAGGCCAAGACCTATGAGGAAAATGGGGCAGCCATGATTTCAGTTTTGACTGACGAAGTCTTCTTCAAAGGTGATATTTCCTATTTGAAAGAAATTTCGACACAGGTAGCGATTCCAACCTTGGCTAAGGACTTCATTATTGATGAGAAACAGATTGTGCGTAGCCGTAATGCGGGTGCGACAGTCATTCTCTTGATTGTAGTGGCCTTGCCAGAAGCTCGTCTCAAGGAGCTCTATGATTTTGCGACTAGCCTTGGCTTGGAAGTCTTGGTTGAAACGCATAATCTGCCAGAATTGGAAGTGGCTCACCGTATTGGTGCTGAAATTATCGGAGTAAACAACCGTAATTTGGTGACATTTGAGACAGATATCAATACCAGTCTTGAGTTATCGACGCATTTCAAGGATAAACCTGTTTATATTTCTGAGTCGGCTATTTTTACAGGTCAGGATGCTGCCCTAGTTGCCCCATATTTTAATGGGATTCTGGTAGGAACTGCCCTTATGACGGCTGACAATGTAGCTAAAAAGGTCAAGGAGTTGCAAATTGACAAAGGTTAA

Protein sequence:

MSKAFLPTILEQKEKEVAQLVMEDLQPLRQTYRLYDFLKSNQNKLQIISEVKKASPSMGDINLDVDIVAQAKTYEENGAAMISVLTDEVFFKGDISYLKEISTQVAIPTLAKDFIIDEKQIVRSRNAGATVILLIVVALPEARLKELYDFATSLGLEVLVETHNLPELEVAHRIGAEIIGVNNRNLVTFETDINTSLELSTHFKDKPVYISESAIFTGQDAALVAPYFNGILVGTALMTADNVAKKVKELQIDKG

GenBank Info

gene - trpC
locus_tag - FAM13496-i1-1.1_001195
EC_number - 4.1.1.48
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011227478.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - indole-3-glycerol phosphate synthase TrpC
protein_id - extdb:FAM13496-i1-1.1_001195

Gene Locus

Located on scaffold FAM13496-i1-1_scf15

FAM13496-i1-1.1_001194
FAM13496-i1-1.1_001196