update range to 10000 bp
locus tag: FAM13496-i1-1.1_001247 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 RNA-binding protein
Ortholog
 N0.HOG0003531 RNA-binding protein
KEGG gene
 K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) kornec02020kornec02025
KEGG gene
 K02487 -
Eggnog Protein
 EP:ylmH
Eggnog Ortholog
 EO:COG2302
Eggnog Description
 ED:S4 RNA-binding domain

Occurs in the following pathway maps:

Pathway Description
kornec02020 Two-component system
kornec02025 Biofilm formation - Pseudomonas aeruginosa

Sequences

Nucleotide sequence (GC-content: 33.3 %):

ATGTTTGAAGCAAAAAATATTGAACAACATTACTCGTTAGAAGAACGTCTTTTTTTAGAAAAGGTTAGGGGATTTTGTCAATTAGTTGAAGATCGGTATAGCCCATATTTGACTGATTTCTTAAATCCTCGTGAAATCCAGATTGTCAAAGATTTAGCAAATTACTATAATTTAAAATTCTTTGTAAGTTCAACTTTTGATAACGAAGAGTATGGAAGAGTGATTCCTGCTCCGGATTATTATGAGCTTGATGAAGATGACTTTGAAATTAAACGATTAGAGATTTCTTATGCTAGACAATTTAATAAATTGACACATCCCAAAATTTTAGGCGCACTGCTTAATCAACTTGGTCTTGAACGTCAAGTATTTGGAGATGTTATTCTTGATGAAGAAGGCCGAGTTCAATTTAACATTGCTTCTCATCTAGCAAGCTATGCAATAATGACTATTACTAAAATCGGTAGGGTTTCGGTTACGCTTAGAGAAGTAAGTAAAGATGATTGGATTTCCAATCAAGAAAAATATTCTCAATCTTTTGTCTTGCTTTCTAGTATGCGTCTTGATAATGTGTTATCTACGGTATTAAAAACATCGCGTTCAAATGCTTTAAAGCTAATTGCTTCAGGCAAAATCAAACTTAATTATAGGCAAATTGAGAAATCTGATCAGATAATATCTATTGGTGATATGATTTCGGTTAGAGGTTTTGGCCGATTTCGTCTAGGTCAACAAGAAGGAATTTCTAAATCAGGAAAAGCCAAGGTCGTCATCGACAGTTTTCTAAGACGACAAAAGTAG

Protein sequence:

MFEAKNIEQHYSLEERLFLEKVRGFCQLVEDRYSPYLTDFLNPREIQIVKDLANYYNLKFFVSSTFDNEEYGRVIPAPDYYELDEDDFEIKRLEISYARQFNKLTHPKILGALLNQLGLERQVFGDVILDEEGRVQFNIASHLASYAIMTITKIGRVSVTLREVSKDDWISNQEKYSQSFVLLSSMRLDNVLSTVLKTSRSNALKLIASGKIKLNYRQIEKSDQIISIGDMISVRGFGRFRLGQQEGISKSGKAKVVIDSFLRRQK

GenBank Info

locus_tag - FAM13496-i1-1.1_001247
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002946448.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - RNA-binding protein
protein_id - extdb:FAM13496-i1-1.1_001247

Gene Locus

Located on scaffold FAM13496-i1-1_scf16

FAM13496-i1-1.1_001246
FAM13496-i1-1.1_001248