locus tag:
FAM13496-i1-1.1_001340
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0001788 |
branched-chain amino acid ABC transporter permease |
|
|
KEGG gene
|
K01997 |
livH; branched-chain amino acid transport system permease protein |
kornec02010kornec02024 |
|
Eggnog Protein
|
EP:livH |
|
|
|
Eggnog Ortholog
|
EO:COG0559 |
|
|
|
Eggnog Description
|
ED:Belongs to the binding-protein-dependent transport system permease family |
|
|
|
Gene Product
|
branched-chain amino acid ABC transporter permease |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec02010
|
ABC transporters |
|
kornec02024
|
Quorum sensing |
Sequences
Nucleotide sequence (GC-content: 40.8 %):
ATGTTTTTTGAACAACTTCCACAACAACTAGTCAATGGTATCATCTTGGGTAGTATCTATGCACTACTTGCCCTTGGTTATACTATGGTTTATGGGATTATCAAATTGATTAACTTTGCCCATGGAGACATCTACATGATAGGTGCCTTCGTTGGTTACTATGCGATTAACAGCTTGAAGATGAACTTCTGGATTGCCCTTGTGTTTTCCATGATTGTATGTGCCATTTTAGGGGTTGTTATCGAGTTCTTGGCTTATCGCCCACTCCGTAATTCGACACGTATTTCTGCCTTGATTACGGCCATTGGTGTGTCATTCTTTCTTGAGTACATCATGGTTTACTTTGTAGGTGCAGATACACGTTCATTCCCACAATCAATCAAGGTGCATACTTATCATCTTGGTTCAATCTCTGTTACAAATGTGCAATTGCTCATTTTGGTAGTTGCTCTTGTGCTTATGGTTGCTCTTCAATTGATCGTTAAGAAGACTAAGATGGGTAAAGCTATGCGTGCTGTGTCTGTTGATAGCGATGCAGCGGAGTTGATGGGTATTAGTGTTAATAATACGATTAGCTTCACTTTTGCTCTTGGATCATCACTTGCAGGGGCTGCCGGTGTCCTCATTGGTCTTTACTATAACTCAATTGAACCTCTTATGGGGATGACTCCAGGTATTAAAGCTTTTGTTGCCGCTGTTCTTGGTGGTATCGGTATTATTCCTGGTGCAGCACTCGGTGGTTTTGTTATTGGTATTTTGGAAACTTTGTCAACTGCAATTGGTTTATCAAGCTACCGTGATGCCATCGTTTATGGTGTCTTGATAGTTATCCTATTGCTTCGTCCAGCGGGTATTCTTGGTAAAAATGTGAAAGAGAAGGTGTAA
Protein sequence:
MFFEQLPQQLVNGIILGSIYALLALGYTMVYGIIKLINFAHGDIYMIGAFVGYYAINSLKMNFWIALVFSMIVCAILGVVIEFLAYRPLRNSTRISALITAIGVSFFLEYIMVYFVGADTRSFPQSIKVHTYHLGSISVTNVQLLILVVALVLMVALQLIVKKTKMGKAMRAVSVDSDAAELMGISVNNTISFTFALGSSLAGAAGVLIGLYYNSIEPLMGMTPGIKAFVAAVLGGIGIIPGAALGGFVIGILETLSTAIGLSSYRDAIVYGVLIVILLLRPAGILGKNVKEKV
GenBank Info
locus_tag - FAM13496-i1-1.1_001340
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011680766.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - branched-chain amino acid ABC transporter permease
protein_id - extdb:FAM13496-i1-1.1_001340
Gene Locus
Located on scaffold FAM13496-i1-1_scf18
FAM13496-i1-1.1_001339
