FAM13496-i1-1.1_001343 - OpenGenomeBrowser

Annotations

Type	Name	Description	Pathways
Ortholog	N0.HOG0001636	ABC transporter ATP-binding protein
KEGG gene	K01996	livF; branched-chain amino acid transport system ATP-binding protein	kornec02010kornec02024
Eggnog Protein	EP:livF
Eggnog Ortholog	EO:COG0410
Eggnog Description	ED:COG0410 ABC-type branched-chain amino acid transport systems
Gene Product	ABC transporter ATP-binding protein

Pathway	Description
kornec02010	ABC transporters
kornec02024	Quorum sensing

Sequences

Nucleotide sequence (GC-content: 39.9 %):

ATGGCTATGTTAAAAGTTGAAAATCTCTCAATTAAATATGGATCTATCGAAGCTGTTAAAAACGTTAGTTTTGAAGTTAATGAAGGTGAAGTTGTAACTCTTATCGGAGCCAATGGAGCAGGTAAAACATCTATTCTTCGTACAATCTCGGGTCTTGTTCGTCCGACTGAAGGAACGATTTCTTACCTTGGAAATGAAATTCACAAAACACCTGCTCGAAAGATTGTTGCAGAAGGTTTGGCTCAAGTGCCTGAAGGACGTCACGTCTTTGCAGGATTAACTGTAATGGAAAATCTTGAAATGGGCGCTTTCCTTCATACAAATAAAGAAGAAAATGCAGCTCTATTGAAAAAAGTCTTCCAACGTTTCCCACGTCTAGAAGAACGTAAGAATCAAGACGCTGCAACACTTTCTGGTGGTGAGCAACAGATGCTAGCGATGGGTCGTGCCCTCATGAGTCGTCCGAAACTTTTGCTTTTGGATGAACCTTCAATGGGGCTTGCTCCAATCTTTATTCAAGAAATCTTTGATATTATTGAAGACATCAAGGCGCAAGGAACTACAGTTCTTTTGATTGAACAAAATGCCAATAAGGCATTATCAATTGCGGATCGTGGTTACGTTCTTGAAACTGGAAAAGTGGTTCTTTCAGGTACTGGTAAAGAACTTCTTGCATCAGACGAAGTTCGTAAAGCCTATCTTGGAGGATAA

Protein sequence:

MAMLKVENLSIKYGSIEAVKNVSFEVNEGEVVTLIGANGAGKTSILRTISGLVRPTEGTISYLGNEIHKTPARKIVAEGLAQVPEGRHVFAGLTVMENLEMGAFLHTNKEENAALLKKVFQRFPRLEERKNQDAATLSGGEQQMLAMGRALMSRPKLLLLDEPSMGLAPIFIQEIFDIIEDIKAQGTTVLLIEQNANKALSIADRGYVLETGKVVLSGTGKELLASDEVRKAYLGG

GenBank Info

locus_tag - FAM13496-i1-1.1_001343
inference - COORDINATES: similar to AA sequence:RefSeq:YP_003029141.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ABC transporter ATP-binding protein
protein_id - extdb:FAM13496-i1-1.1_001343

Annotations

Occurs in the following pathway maps:

Sequences

GenBank Info

Gene Locus