locus tag:
FAM13496-i1-1.1_001357
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
RNA helicase |
|
|
|
Ortholog
|
N0.HOG0001707 |
DEAD/DEAH box helicase |
|
|
Eggnog Protein
|
EP:snf |
|
|
|
Eggnog Ortholog
|
EO:COG0553 |
|
|
|
Eggnog Description
|
ED:Superfamily II DNA RNA helicases |
|
|
Sequences
Nucleotide sequence (GC-content: 39.7 %):
ATGGCGAAATTGATTCCGGGTAGAGTCCGTAATGAGGGAATTAAACTTTTTGAAAAGGGTTTAATTGCCATTAGTCAGGTCTCAGAAACTCAGTTGGACACGACGGTTGGTCAACATCATTTAATTTATGCACTCGATGATCCTGAAATCATGTGTGACTGTGATTTTTTCGCTCAAAAAGGCTATTGCTCCCATTTGGCAGCGGTTGAGTACTATCTAAAAAATGCTAAGGAGGGCCAGCGTCTCTTAGCAAAATTAGAGGAGAAACAAGAGTCCGCCCAGGACCAAGAGCGGGGGCGTTCTTTTGGTGGTTTATTTTTAGAGAGCCTTTCTCTGAATGAGAATGATACAGTTAGATATAGCCTCACGGTAGAGGGAGAGGAATCTACCTTTGGTTCAGAGATTTGGTGGAGTTTACGTTTACGTCGCTTACCGGACGAACGTTCTTACGTTGTTCGAGATATCCCAGCCTTCCTCAAGCTTATAGAGACTGAAGGCTATTATCAGATAGGTAAGAATTACTATGAACCTCTATCACTCATTCAGTTTGACCAGGCTTCACAAGCATTTTTAGACTTTTTAGGACGGATGATTCCAGATGAAGCCAAAACAAATTTAACCTTTATTTTACCGAATAATGCACGACACCTTAGTCTCCCCTATGGTTTTTTTGAGGAGGGATTGAGGTTGATGCAAGATTTGGATGGCTTCAGGTTTGAATGGGAAGGTATTGAATATCGCAGCTTTTTGGTAGAGGACTTGACTGCTGAAGCCAATCTTTTCTCGTTTGATATTTGTGTCGAGCCCAAAATGATTGAATTGACTGTTGCTGAGAAAAATAGCCAAACATTTTTTAATAATCGTATTATCTTTTATCAGGGTGTTTTCTATCGTCTTAATAGAAAACAGCAAAAAATTTTGCTTGGCTTACGTTCTCTCCCTATCGGAAGCGATTTGAATAAACATGTCAGTTTTAATCTAGAAGAACAAGCTATCTTAGCTGCTAGTCTTTCTGATTTTAAGACTATGGGACCGGTTAAAGCCCCAAAAGCGTTTAATATCAAAGATTTCACCCCGAGATTTCGCTTTGATTTGAAAGGTGAACGCGAGGTTGTGCTCACATTGGCTTTTGATTTTGATGGATATGTTGTGGATAATCGTTATGAGTTAAGTCATTTAGGCTTTACTAGTAACTATCGTAATGAACAGGCTATTTTTCGTTTGATGGTTAAACATGGATTTACCCCTGATTTTCAGTCATCTAAACGCTTAAATAGTAATCAAGAGCTCTATGATTTCTTTATAAATACTCTACCAGCTTTTGAAAATGCAGGGCCAGTTCTTATTGGACAGGAGTTGCGTGACTTACGTGTTGAACAGAGTCCACAAATTCAGGTAGAGCGTCAAGGAAATCTATTAGAGATTTCGTTTGATTTTTCAAGTCTCGATGATGAGGATGTGGATCATGCTTTAGAAGCTTTGATGGACAGAGCGCCCTACTTTGTTAATCGTAGTGGTCAGTTGATTGTCTTTGATGAGGGGACACAACGTATCAGTGAGAGTCTAAGAACTTTGAGGGCCCGTTATTCGGGGGAAGGGCATCTAGAACTCCATCAATTAGCCGCCTATCAATTGATGGACTCTCTTTCAGAAAATGATTCTGTTCGTTTTTCAGAAGATTTTCAACAGCTAGCGCAACATTTGAGAAAACCGGAAACATTCGACTTGCCATCCTATCATGTAGAAGTTGACCTTCGTCCTTACCAAGAAAGAGGAGTTCAATGGCTATCAATGTTGCATCACTATGGTTTTGGTGGTATTTTAGCCGACGATATGGGGTTGGGGAAAACTTTACAGACCATTGCTTATCTTTCTGCACATTTAGAGGATGGACAACGAGTCTTGATTCTATCGCCATCGAGTTTAATTTACAATTGGCAGGATGAGTTTAAAAAATTTGCTCCTCAGTTAGATGTAGCAGTTTCTTATGGACTTAAGCCAAAACGTGATGAGATCATTGCAGAAGACCATCAGATTATTATTACTAGCTATGCTTCATTCCGTCAGGATTTTGATGTTTATAAGGCTGGTCAGTATGATTATCTCATTCTAGATGAGGCACAGGTCATGAAGAATACTCAGACGAAGATTTCTCAATATTTACGTGATTTTTCTGTTCCGCATTGCCTAGCTCTATCTGGAACGCCTATTGAAAATCATTTGTTGGAGATTTGGTCTATTTTCCAGATTGTTTTACCAGGGCTTTTACCAGCTAAGAAAACTTTTCTTAAGCTAACACCTATGGAAGTGGCCCGGTACATTACTCCATTTATTCTTAGACGTAAAAAAGATGAGGTTCTTCCTGATTTACCGGACCTGATTGAAATTACACACCAAAGTGAATTGTCGGATAGTCAAAAGGCTATTTATTTAGCACAATTGCAACAGATGCAACAAGGTTTAATTTCAGCAAGTGATCAGGAAATCAATCGTCGTAAGGTGGAAATCTTGTCAGGAATTACCCGCTTACGCCAAATCTGTGACACGCCAGCCCTCTTTATGGATTACGCTGGTGATAGTGGGAAATTAGATAGTCTTAGAGACCTACTTAGTCAAATTAAGGAATCAGACCATCGTGTCCTTATTTTTTCACAATTTCGTGGGATGTTAGATATTACAGAGGAACTTTTACAAGAGTTAGGTATTTCCTCTTATAAGCTAACAGGGTCGACCCCATCTGATAGTCGTCAGGAGATGACCAGAGCCTTCAATCAGGGGAGTCGAGATGCCTTTTTGATTTCTTTAAAAGCAGGGGGGGTAGGGCTCAACTTGACTGGTGCTGATACAGTTATTCTGATTGACCTTTGGTGGAATCCAGCGGTGGAAATGCAGGCTATTAGTCGTGCTCATCGTATAGGTCAGAAACAAAATGTCGAAGTTTTCCGTTTGATTACAAGAGGTACTATCGAAGAGAAGATTCTTGAGCTTCAAGAAGGTAAGAAAAATCTCGTTACAACAGTATTAGATGGCAATGAAAGCTGTGCTAGCATGACAGTTGAGGATATTAAAGAAATTCTTGGTATTGCAATATCTTAA
Protein sequence:
MAKLIPGRVRNEGIKLFEKGLIAISQVSETQLDTTVGQHHLIYALDDPEIMCDCDFFAQKGYCSHLAAVEYYLKNAKEGQRLLAKLEEKQESAQDQERGRSFGGLFLESLSLNENDTVRYSLTVEGEESTFGSEIWWSLRLRRLPDERSYVVRDIPAFLKLIETEGYYQIGKNYYEPLSLIQFDQASQAFLDFLGRMIPDEAKTNLTFILPNNARHLSLPYGFFEEGLRLMQDLDGFRFEWEGIEYRSFLVEDLTAEANLFSFDICVEPKMIELTVAEKNSQTFFNNRIIFYQGVFYRLNRKQQKILLGLRSLPIGSDLNKHVSFNLEEQAILAASLSDFKTMGPVKAPKAFNIKDFTPRFRFDLKGEREVVLTLAFDFDGYVVDNRYELSHLGFTSNYRNEQAIFRLMVKHGFTPDFQSSKRLNSNQELYDFFINTLPAFENAGPVLIGQELRDLRVEQSPQIQVERQGNLLEISFDFSSLDDEDVDHALEALMDRAPYFVNRSGQLIVFDEGTQRISESLRTLRARYSGEGHLELHQLAAYQLMDSLSENDSVRFSEDFQQLAQHLRKPETFDLPSYHVEVDLRPYQERGVQWLSMLHHYGFGGILADDMGLGKTLQTIAYLSAHLEDGQRVLILSPSSLIYNWQDEFKKFAPQLDVAVSYGLKPKRDEIIAEDHQIIITSYASFRQDFDVYKAGQYDYLILDEAQVMKNTQTKISQYLRDFSVPHCLALSGTPIENHLLEIWSIFQIVLPGLLPAKKTFLKLTPMEVARYITPFILRRKKDEVLPDLPDLIEITHQSELSDSQKAIYLAQLQQMQQGLISASDQEINRRKVEILSGITRLRQICDTPALFMDYAGDSGKLDSLRDLLSQIKESDHRVLIFSQFRGMLDITEELLQELGISSYKLTGSTPSDSRQEMTRAFNQGSRDAFLISLKAGGVGLNLTGADTVILIDLWWNPAVEMQAISRAHRIGQKQNVEVFRLITRGTIEEKILELQEGKKNLVTTVLDGNESCASMTVEDIKEILGIAIS
GenBank Info
locus_tag - FAM13496-i1-1.1_001357
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002947757.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - RNA helicase
protein_id - extdb:FAM13496-i1-1.1_001357
Gene Locus
Located on scaffold FAM13496-i1-1_scf19
FAM13496-i1-1.1_001356
