update range to 10000 bp
locus tag: FAM13496-i1-1.1_001372 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
KEGG reaction
 R00451 meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming); meso-2,6-Diaminoheptanedioate <=> L-Lysine + CO2 kornec00300kornec01100kornec01110kornec01120kornec01230
Ortholog
 N0.HOG0001438 diaminopimelate decarboxylase
KEGG gene
 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] kornec00300kornec01100kornec01110kornec01120kornec01230
Eggnog Protein
 EP:lysA
Eggnog Ortholog
 EO:COG0019
Eggnog Description
 ED:Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
EC Number
 EC:4.1.1.20 diaminopimelate decarboxylase; diaminopimelic acid decarboxylase; meso-diaminopimelate decarboxylase; DAP-decarboxylase; meso-2,6-diaminoheptanedioate carboxy-lyase kornec00300kornec01100kornec01110kornec01120
Gene Product
 diaminopimelate decarboxylase

Occurs in the following pathway maps:

Pathway Description
kornec00300 Lysine biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 40.6 %):

ATGACAAAAACACCCTTTATTACGGCGGATAAACTCGATCAAATCACTGCAGAATTTCCAACACCTTTCCACCTTTACGATGAAAAAGGTATTCGTGAAACAGCGCGTGCAGTTAATGCAGCCTTTTCATGGAATCCTGGTTTTAAAGAATTCTTTGCTGTAAAGGCAACACCTAATCCAGCAATTCTCAAAATCTTGAAGGAAGAAGGGTGCGGTGTAGATTGTGCGACTGATACAGAGCTTGTCATGAGTAACAAAGTTGGTTTTGATAGTACTGCTATTAGTTTTACGTCTAATGATACACGAGCAGAAGAATTTGTTTACGCGCGTGATATCAATGCGATAATTAACCTTGATGCTTACGAAGATATTTTCTTCTTGGAAGAGTCTGCAGGGCTTCCTGAAACGCTTTCTTTACGCTTTAACCCAGGTGGTGTCTTCTTACTTGGTACAGATATTATGGATCATCCTGAAGAATCTAAATTTGGGATGACTAAGGAGCAACTTTTCAAAGGTTATGCCTACCTTAAAGAAAAAGGGGTGAAATCATTCGGTTTGCATGCCTTCTTGGCGTCAAATACAGTAACGAATGAGTACTATCCAACCTTGGCTGCTCAACTCTTTGAATTGGCTGTAGAAATCAAGAATGAGCTTGGTATCAGCCTTGACTTTATCAACTTATCAGGTGGTGTTGGGGTAGACTACACGCCAGCGAACAAGCAAAACGATATTGCTGCTATCGGTGAAGGTGTTCATACTAAATTTGATGAAATCCTTGTTCCAAATGATCTTGGAGACATCAGTATTTACACTGAACTTGGTCGTTTCATGACAGCGCCACACGGACTCCTTGTTACTAAGGTTCTCCATATTAAGGATACTTATCGACGTTATGTTGGTGTTGATGCTTCTGCAGTTAACTTGCTTCGCCCAGCAATGTACGATGCCTACCACCACATTACTAATATGACTAATCCAAATGGTGATATTCAAGTGGTTGATGTCACAGGTTCGCTTTGTGAAAACAATGACAAGTTTGCTAAGAACCGTGAATTGCCTGAGGCTCGTATTGGGGATACCTTGGTTATCCATGATACTGGTGCCCATGGTTTTTCAATGGGTTATAACTATAATGGCCGTCTTCGTTCAGCAGAAATCCTCTATCAAGAAGATGGAACAGCGCGAATGATTCGTCGTGCAGAGACTATGAATGATTATTTTGCGACACTTGACGGATTTGATTTTGAAATTTAA

Protein sequence:

MTKTPFITADKLDQITAEFPTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDTELVMSNKVGFDSTAISFTSNDTRAEEFVYARDINAIINLDAYEDIFFLEESAGLPETLSLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTNEYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDEILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAYHHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNYNGRLRSAEILYQEDGTARMIRRAETMNDYFATLDGFDFEI

GenBank Info

locus_tag - FAM13496-i1-1.1_001372
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014607943.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - diaminopimelate decarboxylase
protein_id - extdb:FAM13496-i1-1.1_001372

Gene Locus

Located on scaffold FAM13496-i1-1_scf19

FAM13496-i1-1.1_001371
FAM13496-i1-1.1_001373