update range to 10000 bp
locus tag: FAM13496-i1-1.1_001379 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Code
 xerD
Gene Product
 site-specific tyrosine recombinase XerD
Ortholog
 N0.HOG0005363 site-specific tyrosine recombinase XerD
Eggnog Protein
 EP:xerD
Eggnog Ortholog
 EO:COG4974
Eggnog Description
 ED:tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site

Sequences

Nucleotide sequence (GC-content: 40.9 %):

ATGACTATATCATCATTCCAAAAACAACTAACAACTCAGATAACTAATTTTCTAGCTAGGAAGACCATTTCTGATAGCTCAAAACAAGCTTATGCTTATGATCTTAAGCAGTTTGTAAACTGTCTTCCAGGACGAGTAGATCAAACCAGTCTCAAGCTTTATGAAAATCAACTTAAGGAGTGGAAGCCTTCTGTGCAAAAACGTAAGCGCTCGGCTGTTAATCAGTTTTTGCTTTACCTTTATCAAAAGGGTGAGCTAGAGGAGTTTTTTAAACTGTCAGAGACTGCACCACTCCCTTCTCAGCAAGAAGAGTTAGAAATCTTTGATTTGTCGTCGCTATATGAGGGACAAGAAGGGCCCGGTAAACTGGCTTGTCTGTTTATTCTAGAGTTAGGACTCTTACCTTCGGAAATCTTGGAGCTGAAATGGGAAGATATCGACTTGGATTTTGGTGTTGTAACCGTGGCTAAGGGAAGTACTAAGCGTGTTCTCAGACTGGATGGAGCTTTGAAAGAGCTCTTATTTGGGATTAAAAATGACAATAGTCAGGGATTAATTTTGAGTAAGGCTTTTACCCGTCAGTGGCTGTATAAGCAGATTCAATCTTATGTTGGTGGATGCGGCTTATCGGGGGTAACTGCTCAAGTCTTGCGCCAGCAATATATCCTTAGACAGATTGAAAAGGGAACGGGCGCCTTTGAACTTGCTCGTTTACTTGGGCTAAAAAGTCCAGTGACCTTGGAGAAATACTATAAAGCCTAA

Protein sequence:

MTISSFQKQLTTQITNFLARKTISDSSKQAYAYDLKQFVNCLPGRVDQTSLKLYENQLKEWKPSVQKRKRSAVNQFLLYLYQKGELEEFFKLSETAPLPSQQEELEIFDLSSLYEGQEGPGKLACLFILELGLLPSEILELKWEDIDLDFGVVTVAKGSTKRVLRLDGALKELLFGIKNDNSQGLILSKAFTRQWLYKQIQSYVGGCGLSGVTAQVLRQQYILRQIEKGTGAFELARLLGLKSPVTLEKYYKA

GenBank Info

gene - xerD
locus_tag - FAM13496-i1-1.1_001379
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014607947.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - site-specific tyrosine recombinase XerD
protein_id - extdb:FAM13496-i1-1.1_001379

Gene Locus

Located on scaffold FAM13496-i1-1_scf19

FAM13496-i1-1.1_001378
FAM13496-i1-1.1_001380