update range to 10000 bp
locus tag: FAM13496-i1-1.1_001394 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0000018 ABC transporter ATP-binding protein
KEGG gene
 K20344 blpA, lagD; ATP-binding cassette, subfamily C, bacteriocin exporter kornec02010kornec02024
KEGG gene
 K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
KEGG gene
 K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
Eggnog Protein
 EP:comA
Eggnog Ortholog
 EO:COG2274
Eggnog Description
 ED:ABC-type bacteriocin lantibiotic exporters
Gene Product
 ATP-binding cassette domain-containing protein

Occurs in the following pathway maps:

Pathway Description
kornec02010 ABC transporters
kornec02024 Quorum sensing

Sequences

Nucleotide sequence (GC-content: 40.7 %):

GTGTTTACGGGAACAATATTAGAAAATCTATTGTTAGTCCTTGAAGGAGAAGTTGATGAGCATCTTATTCTGAAAGTCTGTGAACAAGTCGATATTTTGGCTGATATTCAAAAGATGCCCCTAGGTTTTCAGACCCAAGTATCTGAAGACGGAGGTCTGTCTGGCGGTCAAAAACAAAGATTAGCTATAGCAAGGGCTCTCTTGTCCAATCAACCAATCTTGATTTTTGATGAAGCTACAAGTGGTCTGGACAGGAAAACTGAAAGTAGAGTAATGGCCAATCTTTCTGAACTGACACGAACAATGATTTTCATTGCTCACCGTAGCAGTGTCTACCAACATGTCAGTCGTGTAGTGACTATGGCAAATGGGAAGCTTGAAGCAGCTAGTCCCAACTTCAATCCATTCCAGTTCATTTAA

Protein sequence:

MFTGTILENLLLVLEGEVDEHLILKVCEQVDILADIQKMPLGFQTQVSEDGGLSGGQKQRLAIARALLSNQPILIFDEATSGLDRKTESRVMANLSELTRTMIFIAHRSSVYQHVSRVVTMANGKLEAASPNFNPFQFI

GenBank Info

locus_tag - FAM13496-i1-1.1_001394
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002946148.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ATP-binding cassette domain-containing protein
protein_id - extdb:FAM13496-i1-1.1_001394

Gene Locus

Located on scaffold FAM13496-i1-1_scf19

FAM13496-i1-1.1_001393
FAM13496-i1-1.1_001395