locus tag:
FAM13496-i1-1.1_001397
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
ribonuclease Y |
|
|
|
Ortholog
|
N0.HOG0001032 |
ribonuclease Y |
|
|
KEGG gene
|
K18682 |
rny; ribonucrease Y [EC:3.1.-.-] |
kornec03018 |
|
Gene Ontology
|
GO:0042802 |
identical protein binding |
|
|
Gene Ontology
|
GO:0005515 |
protein binding |
|
|
Gene Ontology
|
GO:0005488 |
binding |
|
|
Gene Ontology
|
GO:0003674 |
molecular_function |
|
|
Eggnog Protein
|
EP:rny |
|
|
|
Eggnog Ortholog
|
EO:COG1418 |
|
|
|
Eggnog Description
|
ED:Endoribonuclease that initiates mRNA decay |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec03018
|
RNA degradation |
Sequences
Nucleotide sequence (GC-content: 41.8 %):
ATGATAAACATGATAATTTTAGTTGTCTTTGCACTCATTGGTTTAGTCGTTGGATATTTAGCAATTTCTATCAAACTTAGCAAAGCTAAGGAACAAGCAGAAACTATCTTGCTAAAGGCAGAACAAGACGCTGTGAATCTTCGTAGTCAGGCAGAACATGATGCAGATCATCTACGTGTAACTGCTGAACGCGAAAGTAAGGCTCAACGTAAAGAGCTCTTGTTAGAGGCAAAAGAGAAAGCTAGAAAATATCGAGAAGATATTGAAGAAGAATTCAAATCTGAACGTCAAGAGCTTAAACAAATGGAGAATCGTTTAACAGAACGTGCAACCAGCCTTGATCGTAAGGATGAAAATCTATCAAGTAAAGAACTCGCCCTCGAGAAAAAAGAGCAGAGTCTTGCTGACAAATCTAAACATCTTAATGAGCGTGAAGAGAATGTGACTCAGTTGGAGGCTGAGAAGCAAGCTGAACTTGAACGTATTGGTCAAATGACCATTGCAGAGGCGCGTGAGGTAATCTTAACAGAGACTGAGAATAATCTTACTCATGAGATTGCAACACGTATCAAAGATGCAGAAGCACAGATCAAAGATACTGTTGATAAGAAGGCCAAAAACTTGTTGGCGCAAGCTATGCAACGTTTGTCTGGAGATTATGTTACTGAACAAACCGTAACCACTGTTCACCTCCCAGATGATAATATGAAAGGTCGTATCATTGGTCGTGAGGGGCGTAACATTCGTACCTTTGAAAGCTTAACAGGTATTGATGTTATCATCGATGATACTCCAGAAGTGGTTGTTCTTTCTGGTTTTGATCCAATCCGTCGTGAGATTGCTCGCATGACTCTCGAAGCCTTGATTAAGGATGGACGTATCCATCCAGCTCGTATTGAGGAGTTGGTTGAGAAGAGTCGTAAGGAAATGGATAACCGTATCCGCGAATATGGTGAAGAGGCAGCTTACGAAATTGGGGCTATGAATCTCCACCCTGACCTAATCAAGATTATGGGACGATTGCAGTTCCGTACTTCATATGGTCAAAACGTACTTCGTCACTCAGTTGAAGTTGGTAAACTAGCAGGTATTATGGCCAGTGAATTGGGTGAGAATGTGGCTCTAGCTCGTCGTGCTGGTTTTCTTCATGATATGGGGAAAGCTATTGACAAAGAGGTCGAAGGTAGTCACGTTGAGATTGGTACTGAGTTTGCACGTAAGTATAAAGAGCATCCAGTCGTGGTTAATGCCATTGCCAGCCACCATGGAGATGTGGAACCTGAGAGTGTGATTGCAGTTATTGTAGCTGCAGCAGATGCTTTGAGTTCGGCTCGCCCAGGAGCTCGTAATGAATCCGTTGAGAATTATGTCAAACGCCTTCGTGATTTGGAAGAGATTGCATCAAGCTTTGACGGTGTTCAAACAAGCTTCGCCCTTCAAGCTGGTCGTGAAATTCGTATTATGGTTCATCCAAATAAAATTTCAGATGATGAAGTTACGATCTTGTCTCACAAGATACGTGAACAAATTGAGAAAAACTTGGATTACTCAGGAAATATTAAGGTTACAGTCATTCGTGAATTCCGTGCGGTTGACTATGCCAAATAA
Protein sequence:
MINMIILVVFALIGLVVGYLAISIKLSKAKEQAETILLKAEQDAVNLRSQAEHDADHLRVTAERESKAQRKELLLEAKEKARKYREDIEEEFKSERQELKQMENRLTERATSLDRKDENLSSKELALEKKEQSLADKSKHLNEREENVTQLEAEKQAELERIGQMTIAEAREVILTETENNLTHEIATRIKDAEAQIKDTVDKKAKNLLAQAMQRLSGDYVTEQTVTTVHLPDDNMKGRIIGREGRNIRTFESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLEALIKDGRIHPARIEELVEKSRKEMDNRIREYGEEAAYEIGAMNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGKLAGIMASELGENVALARRAGFLHDMGKAIDKEVEGSHVEIGTEFARKYKEHPVVVNAIASHHGDVEPESVIAVIVAAADALSSARPGARNESVENYVKRLRDLEEIASSFDGVQTSFALQAGREIRIMVHPNKISDDEVTILSHKIREQIEKNLDYSGNIKVTVIREFRAVDYAK
GenBank Info
locus_tag - FAM13496-i1-1.1_001397
inference - COORDINATES: similar to AA sequence:RefSeq:NP_269682.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ribonuclease Y
protein_id - extdb:FAM13496-i1-1.1_001397
Gene Locus
Located on scaffold FAM13496-i1-1_scf20
FAM13496-i1-1.1_001396
