update range to 10000 bp
locus tag: FAM13496-i1-1.1_001410 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
KEGG reaction
 R02466 3-sulfino-L-alanine carboxy-lyase; 3-Sulfino-L-alanine <=> Hypotaurine + CO2 kornec00430kornec01100
KEGG reaction
 R01682 3-sulfo-L-alanine carboxy-lyase (taurine-forming); L-Cysteate <=> Taurine + CO2 kornec00430kornec01100
KEGG reaction
 R00489 L-aspartate 1-carboxy-lyase (beta-alanine-forming); L-Aspartate <=> beta-Alanine + CO2 kornec00410kornec00770kornec01100kornec01110kornec01240
KEGG reaction
 R00261 L-glutamate 1-carboxy-lyase (4-aminobutanoate-forming); L-Glutamate <=> 4-Aminobutanoate + CO2 kornec00250kornec00650kornec01100kornec01120
Ortholog
 N0.HOG0001982 glutamate decarboxylase
KEGG gene
 K01580 E4.1.1.15, gadB, gadA, GAD; glutamate decarboxylase [EC:4.1.1.15] kornec00250kornec00410kornec00430kornec00650kornec01100kornec01110kornec01120kornec02024kornec04727kornec04940
Gene Product
 glutamate decarboxylase
Eggnog Ortholog
 EO:COG0076
Eggnog Description
 ED:Belongs to the group II decarboxylase family
EC Number
 EC:4.1.1.15 glutamate decarboxylase; L-glutamic acid decarboxylase; L-glutamic decarboxylase; cysteic acid decarboxylase; L-glutamate alpha-decarboxylase; aspartate 1-decarboxylase; aspartic alpha-decarboxylase; L-aspartate-alpha-decarboxylase; gamma-glutamate decarboxylase; L-glutamate 1-carboxy-lyase kornec00250kornec00410kornec00430kornec00650kornec01100kornec01110kornec01120

Occurs in the following pathway maps:

Pathway Description
kornec00250 Alanine, aspartate and glutamate metabolism
kornec00410 beta-Alanine metabolism
kornec00430 Taurine and hypotaurine metabolism
kornec00650 Butanoate metabolism
kornec00770 Pantothenate and CoA biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01240 Biosynthesis of cofactors
kornec02024 Quorum sensing
kornec04727 GABAergic synapse
kornec04940 Type I diabetes mellitus

Sequences

Nucleotide sequence (GC-content: 42.3 %):

ATGGATGAGAAGCTATTCAGAGAGATTATGGAGATTAATCCAATCTATGCTCGCCCCGGAGAAAACACTGAGGCACCAAGGTTTAAAATGCCAACAGATGCGATGTTACCAGAGACTGCTTACCAAATTGTTCATGACGAATCAATGATGGATGGTAATGCCCGTTTGAATTTGGCAACATTTGTTTCCACTTGGATGGATGAACGAGCAGATAAATTGTATCGGGAAGCTTTTGACAAAAATGCTATTGATAAAGACGAGTATCCAGAGACTGCTCGGATTGAGACCTATTGTTGGACAATGTTGGCTGATTTGTGGCATGCGCCGAAACCAAAAGAAACTATCGGCTGTTCTACCACTGGTTCTTCAGAAGCGTGTATGTTAGGTGGTCTGGCTTTGAAACGCCGATGGCAAGAAAAACGTAAAGCAGAAGGTAAGCCTATTGACAAGCCAAATTTGGTAATGAGCTCGGCAGTTCAAGTTTGTTGGAAAAAGTTTTGCAATTATTTCGATGTGGAGCCACGTTATGTACCAATCAGTTTAGAACACAAAGTTTTGGATGGATATGAATTAGAAAAATACGTGGATGAGAATACCATTGGTGTGGTTGCCATCATGGGTGTGACTTACACTGGGATGTATGAACCGGTAGACAAGATTGCTAAAGTTTTGGATGGGATCCAAGAAAAAACTGGACTGGATATCCAAATCCATGTGGATGCTGCTTCCGGTGGAATGATCGCACCTTTTTTACAACCGGATAATGTATGGGATTTTCGTTTAGAACGCGTAGCTTCTATCAATACTTCAGGTCATAAGTATGGGTTGGTTTATCCTGGATTAGGCTGGGTAGTGTGGCGTGATTGTCAGTCACTGCCTGACAGTTTGATTTTTAAAGTAAGTTATCTGGGAGGAACGATGCCGACGTTCGCTTTGAATTTCTCACGTCCGGGGGCGCAGATTCTGTTGCAATATTGGGCGTTTTTGCGTTACGGTTTTGAAGGTTATAAAAAAGTACAAGGTGCCACAAGTGATGTGGCGCGTTATTTGGCTAATGAGATTAAAAAGATTGGCCCCTTTGAGTTGTGGAATGATGCTTCGGATATTCCGGTGTTTGCTTGGATGATGAAAAAAGATCAAAAACACAATTGGGGGCTTTATGATCTATCTGATCGGTTACGGATGAAAGGCTGGTTGATACCAGCGTATCCGATGCCAACCAATTTAACAGATTTGACTGTTCAACGAATCGTTGTGCGAAACGGTTTGGGGATGGATCTAGCGGATCAATTGATTAACGATATGAAAACCGAAGTCGCTTATCTTGAAAAATTGGATCAGCCACTACCGGAAAATCATCGCAGCGGCTTCCATCATTAA

Protein sequence:

MDEKLFREIMEINPIYARPGENTEAPRFKMPTDAMLPETAYQIVHDESMMDGNARLNLATFVSTWMDERADKLYREAFDKNAIDKDEYPETARIETYCWTMLADLWHAPKPKETIGCSTTGSSEACMLGGLALKRRWQEKRKAEGKPIDKPNLVMSSAVQVCWKKFCNYFDVEPRYVPISLEHKVLDGYELEKYVDENTIGVVAIMGVTYTGMYEPVDKIAKVLDGIQEKTGLDIQIHVDAASGGMIAPFLQPDNVWDFRLERVASINTSGHKYGLVYPGLGWVVWRDCQSLPDSLIFKVSYLGGTMPTFALNFSRPGAQILLQYWAFLRYGFEGYKKVQGATSDVARYLANEIKKIGPFELWNDASDIPVFAWMMKKDQKHNWGLYDLSDRLRMKGWLIPAYPMPTNLTDLTVQRIVVRNGLGMDLADQLINDMKTEVAYLEKLDQPLPENHRSGFHH

GenBank Info

locus_tag - FAM13496-i1-1.1_001410
EC_number - 4.1.1.15
inference - COORDINATES: similar to AA sequence:RefSeq:WP_008794048.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - glutamate decarboxylase
protein_id - extdb:FAM13496-i1-1.1_001410

Gene Locus

Located on scaffold FAM13496-i1-1_scf20

FAM13496-i1-1.1_001409
FAM13496-i1-1.1_001411