update range to 10000 bp
locus tag: FAM13496-i1-1.1_001444 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 YSIRK-type signal peptide-containing protein
Ortholog
 N0.HOG0005010 YSIRK-type signal peptide-containing protein
Eggnog Protein
 EP:crpB
Eggnog Ortholog
 EO:COG2373
Eggnog Description
 ED:the current gene model (or a revised gene model) may contain a frame shift

Sequences

Nucleotide sequence (GC-content: 36.6 %):

GTGTGGAGGATTACCAAAGTGGGTAAAGATTTATTAAATAATTGTATAAGTAGATTTTCAATTCGTAAACTCAATGTAGCCGTGTGCTCTGTCTTACTTGGAACTCTTGTAATGCTTGGTACTGATAACAAAGTTTTAACAGACGAGTTAACTACAGAAGTTCAAACAGTGCCGCTACACCACTAG

Protein sequence:

MWRITKVGKDLLNNCISRFSIRKLNVAVCSVLLGTLVMLGTDNKVLTDELTTEVQTVPLHH

GenBank Info

locus_tag - FAM13496-i1-1.1_001444
inference - COORDINATES: protein motif:HMM:TIGR01168.1
note - The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site, while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - YSIRK-type signal peptide-containing protein
protein_id - extdb:FAM13496-i1-1.1_001444

Gene Locus

Located on scaffold FAM13496-i1-1_scf21

FAM13496-i1-1.1_001443
FAM13496-i1-1.1_001445