locus tag:
FAM13496-i1-1.1_001534
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
peptide chain release factor 2 |
|
|
|
Ortholog
|
N0.HOG0001162 |
peptide chain release factor 2 |
|
|
KEGG gene
|
K02836 |
prfB; peptide chain release factor 2 |
|
|
Eggnog Protein
|
EP:prfB |
|
|
|
Eggnog Ortholog
|
EO:COG1186 |
|
|
|
Eggnog Description
|
ED:Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA |
|
|
Sequences
Nucleotide sequence (GC-content: 42.0 %):
ATGGAAGTGGCAGAAATTCGCCAAAAAATCTCTGAAAATCAAGAGAAGCTCGTGAGCTTCGGGAGGTCTCTTTGACTTAGATCGTTTGGAAGAGGACATTGCGCTCCTTGAAAACCGAATGACTGAGCCAGATTTTTGGAATGATAATATTGCGGCTCAAAAGACCTCTCAAGAGTTAAATGAGCTCAAAATAAAATATGAAACTTTCAACAACATGAAAGAGCTCTCTGACGAGACAGAGCTTTATTTGGAAATGTTGGAAGAAGATGATAGCGTTCAAGAGGAACTCGAAGAAACGCTCGAAAAACTTGATAAGATTATGACAAGTTACGAGATGACGTTGCTTTTGTCTGAGCCATATGACCATAACAATGCCATTCTTGAAATTCATCCAGGATCTGGTGGAACTGAAGCTCAGGACTGGGCAGAAATGTTACTCCGTATGTACCAGCGTTATGGAAATGCCAAAGGTTTCAAAGTTGAGACTTTGGATTATCAGGCTGGTGATGAGGCTGGAATCAAATCTGTAACTCTTGCTTTTGAGGGACCTAATGCATATGGATTCCTCAAGTCAGAAATGGGTGTTCACCGTTTGGTTCGTATCTCACCATTTGACTCTGCTAAGCGTCGTCACACTTCATTTACATCAGTGGAAGTCATGCCTGAATTAGATGATACCATTGAAGTCGAAATCCGTGATGACGATATCAAGATGGATACTTTCCGATCAGGTGGTGCAGGTGGTCAGAACGTCAATAAGGTTTCTACCGGTGTGCGTTTGACTCACATTCCAACAGGTATTGTTGTAGCTTCTACGGTTGACCGTACACAATACGGAAACAGAGACCGTGCTATGAAGATGCTTCAAGCTAAGCTCTATCAAATGGAGCAAGAAAAAAAAGCAGAAGAAGTGAATGCCTTGAAAGGTGATAAGAAAGAAATCACTTGGGGAAGCCAAATCCGCTCATATGTTTTCACCCCATATACCATGGTTAAAGATCACCGTACAGGCTATGAAGTTGCTCAGGTTGATAAAGTAATGGATGGGGATATTGAAGGTTTCATCGATGCCTACCTCAAGTGGCGCATGGAAGAATAG
Protein sequence:
MEVAEIRQKISENQEKLVSFGRSLDLDRLEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEMLEEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWRMEE
GenBank Info
locus_tag - FAM13496-i1-1.1_001534
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011889043.1
ribosomal_slippage -
note - programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - peptide chain release factor 2
protein_id - extdb:FAM13496-i1-1.1_001534
Gene Locus
Located on scaffold FAM13496-i1-1_scf23
FAM13496-i1-1.1_001533
