Annotations

Type Name Description Pathways
Gene Product
YSIRK-type signal peptide-containing protein
Eggnog Ortholog
EO:COG3266
Eggnog Description
ED:Glucan-binding protein C

Sequences

Nucleotide sequence (GC-content: 37.2 %):

ATGGGAAGAAGAGATTTGCAATGTTTTTCAATCAGAAAGTATAGCTTTGGAGATGCCTATGTTCTTTTGGGTACAACCATTCTTGTGATGGAAGCGGTTGGTGTACAGCATTTTAAGGTTTCAACTTCAGCTGTCACTGATACGCCACTCAGTGTTTCTGTGCTAACAGATACCGCTGTCAATTCATCAACTGTTAATCATTCAGAGAAGCAAGTTGTTTCTGTCAAAGAAGACGGAAATATCACTTTCCCAACAAGTGTTGTTACAACTGATATTTTTGAAGATGCTAAAGCCTCTGCGATAAAAAAAGGGGTAGAAGTCGAAGAAACTACATTTCAATCACATACATCTTTAGAGAGTACTATTGCTGACAATCATGCACAATCAAAAGAGATTAATACAGTTGGTTATGGTTAA

Protein sequence:

MGRRDLQCFSIRKYSFGDAYVLLGTTILVMEAVGVQHFKVSTSAVTDTPLSVSVLTDTAVNSSTVNHSEKQVVSVKEDGNITFPTSVVTTDIFEDAKASAIKKGVEVEETTFQSHTSLESTIADNHAQSKEINTVGYG

GenBank Info

locus_tag - FAM13496-i1-1.1_001554
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011227256.1
note - The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site, while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - YSIRK-type signal peptide-containing protein
protein_id - extdb:FAM13496-i1-1.1_001554

Gene Locus

Located on scaffold FAM13496-i1-1_scf23


FAM13496-i1-1.1_001553
FAM13496-i1-1.1_001555