locus tag:
FAM13496-i1-1.1_001626
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000114 |
IS3 family transposase, partial |
|
|
KEGG gene
|
K07497 |
K07497; putative transposase |
|
|
Gene Product
|
IS3-like element ISSth1b family transposase |
|
|
|
Eggnog Ortholog
|
EO:COG2801 |
|
|
|
Eggnog Description
|
ED:integrase core domain |
|
|
Sequences
Nucleotide sequence (GC-content: 40.1 %):
ATGTCCAAAAGAAGTCCAAAATCTGTATCTGAGAAACTAGAAATTGTTCTGCTTCACTTGGAAGAAGGTAAATCACTTAGTTGGTTAACTAGAAACCAAGGTATCTCTAAAGACACCCTATCGAACTGGGTTCGGAAGTACAAAGAAGCTGGTGTTGATGGGCTAGAGGAAAGCCGCCAATGGAAGAAGTATAGTAAGGAACTAAAGGAACAAGCTGTTTCCGACTATCTTAATGGCTTGGGAAGTCTCAAAGATCTGACCAAAAAATATGGAATTTCTGACCCTTATGTTCTCAGATCATGGATAAAAAGTTATACTAGTGGTAAAGAACTGAAAGCTACTAGTAAAGGAATGAGACGCATGAAGCAAGGACGCAAGACAACATTTGAAGAACGAATTGAGATTGTCAATTTTACCCTTGCCCACGAGAAAGATTACCAAGGGACTGTTGAGAAGTATGGTGTTTCCTACCAGCAGATCTATTCTTGGGTCAGAAAGTTCGAGAAGGACGGTTCTAACGGTCTCCTAGATCGTCGTGGAAAAGGTCTTACAAGTAAACCAAACCTTACTCCAGAAGAAGAGTTACGCCTCAAAATCAAGCAACAGGAAGAGCGGATTAAGTATCTTGAAATGGAGAACGGCCTGCTAAAAAAGTTAGAAGAAATCAAACGACGAAACCGACGGTAAGACTTGGTCGGCACTTGGAAACCTTCCAAGCGATTAAAGAATATGCGGATGAGTATGAAGAGGTTTCTATCAGCCACTTGTGCCATATTCTAAAGGTATCTCGCTCAGGCTATTACAAGTGGTTACAACATCAAGAAACAACTTCTGAACAGGAAAATTTAGGCTTGATGGATATCATCAAGAAACTTCATAGCCAGCATAATGGTATTCTTGGTTATCGTCGTATGACGCTATTTGTCAATCGCAAGCTTGAAACAAACTACAACAAGAAGCGGATTCGACGCTTGATGCACATTCTAGGTCTACGTTCCATTATCAGAAGAGCCAAGGGCTATTGTACTAAAACTAGCTTTGTCAATGTAGAGGACAACATTCTCAATCGTAATTTTACAGCCACTGCTCCAAATCAGAAATGGTGTACAGATGTGACTTTCTTGAAGTACGGTTTCAGCTGTAAAGCCTATTTGAGTGCTATTAAGGATCTTTACGACGGCTCAATTGTCGCCTATGTAGTTGGTCAATTTAATGATAACGAATTGGTATTGGAAACACTTCGTAAAGCACAAAAAGCTAATCCTAATGCGACACCATTAATTCACAGCGACCGAGGTTCGCAGTATACTTCGAAAGATTATTACCGTTTAACTACCCAGTATCAGATGACCCGCTCCATGTCTCGTGTTGGTAAGTGTATTGACAATGCACCAATTGAGAGTTTCTTTGGGCACTTTAAGACGGAGTGCTATGATTTGAAGAAGTATAAGACTTTTGAGGAGCTAGTTTCAGATATTGATGCCTACATCTATTTTTACAATCA
Protein sequence:
MSKRSPKSVSEKLEIVLLHLEEGKSLSWLTRNQGISKDTLSNWVRKYKEAGVDGLEESRQWKKYSKELKEQAVSDYLNGLGSLKDLTKKYGISDPYVLRSWIKSYTSGKELKATSKGMRRMKQGRKTTFEERIEIVNFTLAHEKDYQGTVEKYGVSYQQIYSWVRKFEKDGSNGLLDRRGKGLTSKPNLTPEEELRLKIKQQEERIKYLEMENGLPKKVRRNQTTKPTVRLGRHLETFQAIKEYADEYEEVSISHLCHILKVSRSGYYKWLQHQETTSEQENLGLMDIIKKLHSQHNGILGYRRMTLFVNRKLETNYNKKRIRRLMHILGLRSIIRRAKGYCTKTSFVNVEDNILNRNFTATAPNQKWCTDVTFLKYGFSCKAYLSAIKDLYDGSIVAYVVGQFNDNELVLETLRKAQKANPNATPLIHSDRGSQYTSKDYYRLTTQYQMTRSMSRVGKCIDNAPIESFFGHFKTECYDLKKYKTFEELVSDIDAYIYFYN
GenBank Info
locus_tag - FAM13496-i1-1.1_001626
inference - COORDINATES: similar to AA sequence:RefSeq:WP_076611955.1
ribosomal_slippage -
note - programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS3-like element ISSth1b family transposase
protein_id - extdb:FAM13496-i1-1.1_001626
Gene Locus
Located on scaffold FAM13496-i1-1_scf25
FAM13496-i1-1.1_001625
