update range to 10000 bp
locus tag: FAM19038-p1-1.1_001902 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
KEGG reaction
 R05688 1-Deoxy-D-xylulose-5-phosphate isomeroreductase; 2-C-Methyl-D-erythritol 4-phosphate + NADP+ <=> 1-Deoxy-D-xylulose 5-phosphate + NADPH + H+ kornec00900kornec01100kornec01110
Ortholog
 N0.HOG0002172 1-deoxy-D-xylulose-5-phosphate reductoisomerase
KEGG gene
 K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] kornec00900kornec01100kornec01110
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901265 nucleoside phosphate binding
Gene Ontology
 GO:1901135 carbohydrate derivative metabolic process
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0090407 organophosphate biosynthetic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0070402 NADPH binding
Gene Ontology
 GO:0055114 obsolete oxidation-reduction process
Gene Ontology
 GO:0051484 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process
Gene Ontology
 GO:0051483 terpenoid biosynthetic process, mevalonate-independent
Gene Ontology
 GO:0050897 cobalt ion binding
Gene Ontology
 GO:0050662 obsolete coenzyme binding
Gene Ontology
 GO:0050661 NADP binding
Gene Ontology
 GO:0048037 obsolete cofactor binding
Gene Ontology
 GO:0046914 transition metal ion binding
Gene Ontology
 GO:0046872 metal ion binding
Gene Ontology
 GO:0046490 isopentenyl diphosphate metabolic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044255 cellular lipid metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0043169 cation binding
Gene Ontology
 GO:0043168 anion binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0036094 small molecule binding
Gene Ontology
 GO:0032787 monocarboxylic acid metabolic process
Gene Ontology
 GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
Gene Ontology
 GO:0030145 manganese ion binding
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0019682 glyceraldehyde-3-phosphate metabolic process
Gene Ontology
 GO:0019637 organophosphate metabolic process
Gene Ontology
 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
Gene Ontology
 GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Gene Ontology
 GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
Gene Ontology
 GO:0016491 oxidoreductase activity
Gene Ontology
 GO:0016114 terpenoid biosynthetic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009240 isopentenyl diphosphate biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008654 phospholipid biosynthetic process
Gene Ontology
 GO:0008610 lipid biosynthetic process
Gene Ontology
 GO:0008299 isoprenoid biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006721 terpenoid metabolic process
Gene Ontology
 GO:0006720 isoprenoid metabolic process
Gene Ontology
 GO:0006644 phospholipid metabolic process
Gene Ontology
 GO:0006629 lipid metabolic process
Gene Ontology
 GO:0006090 pyruvate metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0006081 cellular aldehyde metabolic process
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000287 magnesium ion binding
Gene Ontology
 GO:0000166 nucleotide binding
Eggnog Protein
 EP:dxr
Eggnog Ortholog
 EO:COG0743
Eggnog Description
 ED:Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
EC Number
 EC:1.1.1.267 1-deoxy-D-xylulose-5-phosphate reductoisomerase; DXP-reductoisomerase; 1-deoxy-D-xylulose-5-phosphate isomeroreductase; 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase kornec00900kornec01100kornec01110
Gene Product
 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Occurs in the following pathway maps:

Pathway Description
kornec00900 Terpenoid backbone biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites

Sequences

Nucleotide sequence (GC-content: 70.6 %):

ATGCGACGCGTGATCCTTCTCGGTTCCACCGGATCCATCGGCACCCAGGCTCTCGATGTGGTGAGGGCCAATCCTCAACGGTTCCAGGTGGTGGGCCTGTCGGCAGGCAGCAACCGGGAGATGCTCGCCGACCAGGCACGGGAGTTCGGCGTCGAGCATCTGGCACTGGGCGCCGAGGAGTCCTGTCAACTGGTTGCCGATGTCGAGGCCGACGTCGTCCTCAACGGCATCACCGGGTCGGTCGGGCTCGGCCCGACCCTGGCCACCCTGAAGGCTGGCAGGTGCCTGGCGCTGGCCAACAAGGAGTCACTCATCGTGGGCGGGGAACTGGTGAGGAGGGCGGCGGCCCCCGGCCAGCTGGTCCCCGTCGACTCCGAGCACTCGGCCATCGCCCAGGCCCTGCGCGCCGGCGCTCCCACCGAGGTCGCGAGGTTGGTGGTGACGGCCTCCGGCGGCCCGTTCCGCGGCTGGACCCACTCCGAGCTGGAGGAGGTCACCCCCGCCCAGGCGCTGGCCCACCCGACCTGGCGGATGGGCCGGGTCGTCACCACCAACTCCGCAACCATGGTCAACAAGGGGCTGGAGGTCATCGAGGCCCACCTGCTCTTCGACGTCGACTACGACAACATCGAGGTGGTCGTCCACCCCCAGTCGGTCGTCCACTCGATGGTCGAGTTCGTCGACGGGTCGACGATCGCCCAGGCCTCCCCGCCCGACATGCGGCTGCCAATCTCGCTGGGCCTGGGCTGGCCCGATCGCGTCCCCGGGGTCGGCCGGCCGCTCGACTGGCACCAGGTCACCAGCTGGACCTTCGAACCCCTCGACGAGCAGACCTTCCCCGCGGTGGCCCTGGCCCGACAGGTGGGACGGGCCGGGGGAACCTACCCGGCGGTCTACAACGCGGCCAACGAACAGGCCGTGGAGGCCTTCCACGCCGGTCGGCTGTCCTTCCCGGGGATTGTCGAGACGATCCAGCGGGTCGTGGAGGCCCACCAGCCGCCCGCCGAGCTCACCCTCGACAGCCTGGCCGGCGCCGAGCAGTGGGCGCGTCGTCGCGCCGATGAGGACATCGCCGCACGGCGGTAG

Protein sequence:

MRRVILLGSTGSIGTQALDVVRANPQRFQVVGLSAGSNREMLADQAREFGVEHLALGAEESCQLVADVEADVVLNGITGSVGLGPTLATLKAGRCLALANKESLIVGGELVRRAAAPGQLVPVDSEHSAIAQALRAGAPTEVARLVVTASGGPFRGWTHSELEEVTPAQALAHPTWRMGRVVTTNSATMVNKGLEVIEAHLLFDVDYDNIEVVVHPQSVVHSMVEFVDGSTIAQASPPDMRLPISLGLGWPDRVPGVGRPLDWHQVTSWTFEPLDEQTFPAVALARQVGRAGGTYPAVYNAANEQAVEAFHAGRLSFPGIVETIQRVVEAHQPPAELTLDSLAGAEQWARRRADEDIAARR

GenBank Info

locus_tag - FAM19038-p1-1.1_001902
EC_number - 1.1.1.267
inference - COORDINATES: similar to AA sequence:RefSeq:WP_019182187.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 1-deoxy-D-xylulose-5-phosphate reductoisomerase
protein_id - extdb:FAM19038-p1-1.1_001902

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

FAM19038-p1-1.1_001901
FAM19038-p1-1.1_001903