locus tag:
FAM19038-p1-1.1_002102
genome:
FAM19038-p1-1.1
species:
Acidipropionibacterium jensenii
taxid:
1749
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000758 |
DEAD/DEAH box helicase |
|
|
KEGG gene
|
K11927 |
rhlE; ATP-dependent RNA helicase RhlE [EC:3.6.4.13] |
kornec03018 |
|
Eggnog Protein
|
EP:rhlE |
|
|
|
Eggnog Ortholog
|
EO:COG0513 |
|
|
|
Eggnog Description
|
ED:Belongs to the DEAD box helicase family |
|
|
|
EC Number
|
EC:3.6.4.13 |
RNA helicase; CSFV NS3 helicase; DBP2; DbpA; DDX17; DDX25; DDX3; DDX3X; DDX3Y; DDX4; DDX5; DEAD-box protein DED1; DEAD-box RNA helicase; DEAH-box protein 2; DEAH-box RNA helicase; DED1; Dex(H/D) RNA helicase; EhDEAD1; EhDEAD1 RNA helicase; eIF4A helicase; KOKV helicase; Mtr4p; nonstructural protein 3 helicase; NPH-II; RHA; RNA helicase A; RNA helicase DDX3; RNA helicase Hera; RNA-dependent ATPase; TGBp1 NTPase/helicase domain; VRH1; GRTH/DDX25 |
|
|
Gene Product
|
DEAD/DEAH box helicase |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec03018
|
RNA degradation |
Sequences
Nucleotide sequence (GC-content: 69.1 %):
ATGGGCACGCGATCCGCAGATCCTGACTCGGGCCGAAGTCCACGACAGCGGGCCTTGACGGGCCCATTTCACGAAGAGGCCACGATCCTGTCTGCTGATTTCTCCGCCCCCACTAGTTTCGCCGAGCTCGGTGTCCGTGACGACATCTGCCAGGCCCTCTCCGGGGTTGGCATCACCGCCCCCTTCCCGATCCAGGCGATGTGCATCCCGATCGCCGTCCAGGGCACCGATCTCATCGGTCAGGCCCGGACCGGCACCGGAAAGACGCTGGCCTTCGGCGTCACCATCCTGCAGCGCATCACCCTTCCCGGGGACGACGGTTGGGATGAGCTGGTCGGCCAGGGCAAGCCCCAGGCACTGGTGATGTGCCCCACCCGCGAACTCGCCCTCCAGGTCTCCCGCGACATCGCCACGGCCGCCAGCGTGCGTGGCGCCCGAGTTCTCACCGTCTACGGCGGGGTCGGCTACGACCCGCAGATCGACGCCCTCAAGTCCGGTGTCGACGTCGTCGTCGGCACCCCCGGCCGGCTCCTGGATCTGGCCCACCGCAAGGACCTTGACCTGTCGCACGCCCGAATCACCGTCCTCGACGAGGCCGACGAGATGCTCGATCTGGGCTTCCTCCCCGATGTCGAGAGACTTCTGGCGATGACGCCGACGAACCGGCAGTCGATGCTCTTCTCGGCGACCATGCCGGCCGCCATCATGGCTCTGGCCAGGGCCCATCTCAACAAGCCGGTGCACATCAGGGCCGAGGGGGCCGATGCTCAGGCCACCGTTCCCGACACCACCCAGTTCGTCTACCAGGCGCACGCGATGGACAAGATCGAGGTCATCGCGCGGATCCTTCAGGCGCGCGATGTCGAGAAGGTCATGATCTTCTGTCGCACCAGGCGGGCCTGCCAGCGGCTGGCCGATGACCTGGAGGACCGCGGCTTCAAGGCCCGGGCCATCCACGGCGATCTCACCCAGGTCGCCCGCGAGAAGGCCCTCAAGAAGTTCCGCTCCGGGGACGCCACCATCCTGGTGGCCACCGATGTGGCGGCGCGCGGGATCGATGTCACCGGTGTCTCCCACGTCATCAACCACGAGTGCCCCGACGACGAGAAGACCTACGTCCACCGGATCGGCCGCACCGGCCGGGCCGGCGCGAAGGGGATCGCGGTGACCCTGGTCGACTGGGCCGATGTCACCCGCTGGAAGATGATCAACAAGGCTCTCGACCTGGGGATCGACGACCCGGTGGTCACCTTCTCGACCTCCCCGCACCTGTACACCGACCTCGACATCCCCGAGGGCACGGTGGGGTTCCTGCCCGGGTTCGACCCGGCGACCCGCGAGCCCAGGCGACGTGACGACGACCGCCACGGCCACCACAAGTCCCACCACGACGACAGCCGCCGCGACGGCGAGCGCAAGGGCCACGCCAGGAAGTCCGGGGATCGCCCCGAGAAGGCCGCCAAGTCGGATCGACCCAAGCGCAAGCGGACTCGACGCCGCAACGGGGAGGTCGTGGCCTCCGGCGAGGACCTGTCCTCCACCGAGCAGGTGTCGGCGCCCTCGGACGCCGATGCTGGCGAGAGGCCCCGTCGCGAGCGAACCGATGCCGGGCGCAGCGGGCATGACGATGCCCGCGAGGACAGGGCGCAGCGCGACGGGTCCAAGCACGATCGCACCCGGCACGACAAGACCGAGCACGAGAAGACCCCACACGAGAAGTCCCGGCATGACAAGGGCAAGCGGGACAAGGACCACGGCCGGTCCCACGACGAGGTGGCGCGGGACAGCGCTCCTCGGCGAGCCGTCGTCGAGACCGAGGCGGCCGTGGCCAACCCTGCCGGTGACGGGCAGCAGCGCGGAACGAGTGCCGGCCAGCGTCGGCGCCGCAGGACCCGCAGGTCGCAGGCCGACTGA
Protein sequence:
MGTRSADPDSGRSPRQRALTGPFHEEATILSADFSAPTSFAELGVRDDICQALSGVGITAPFPIQAMCIPIAVQGTDLIGQARTGTGKTLAFGVTILQRITLPGDDGWDELVGQGKPQALVMCPTRELALQVSRDIATAASVRGARVLTVYGGVGYDPQIDALKSGVDVVVGTPGRLLDLAHRKDLDLSHARITVLDEADEMLDLGFLPDVERLLAMTPTNRQSMLFSATMPAAIMALARAHLNKPVHIRAEGADAQATVPDTTQFVYQAHAMDKIEVIARILQARDVEKVMIFCRTRRACQRLADDLEDRGFKARAIHGDLTQVAREKALKKFRSGDATILVATDVAARGIDVTGVSHVINHECPDDEKTYVHRIGRTGRAGAKGIAVTLVDWADVTRWKMINKALDLGIDDPVVTFSTSPHLYTDLDIPEGTVGFLPGFDPATREPRRRDDDRHGHHKSHHDDSRRDGERKGHARKSGDRPEKAAKSDRPKRKRTRRRNGEVVASGEDLSSTEQVSAPSDADAGERPRRERTDAGRSGHDDAREDRAQRDGSKHDRTRHDKTEHEKTPHEKSRHDKGKRDKDHGRSHDEVARDSAPRRAVVETEAAVANPAGDGQQRGTSAGQRRRRRTRRSQAD
GenBank Info
locus_tag - FAM19038-p1-1.1_002102
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070710.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DEAD/DEAH box helicase
protein_id - extdb:FAM19038-p1-1.1_002102
Gene Locus
Located on scaffold FAM19038-p1-1_scf1
FAM19038-p1-1.1_002101
