Annotations

Type Name Description Pathways
Gene Product
threonylcarbamoyl-AMP synthase
KEGG reaction
R10463 ATP:L-threonyl,bicarbonate adenylyltransferase; L-Threonine + ATP + HCO3- + H+ <=> L-Threonylcarbamoyladenylate + Diphosphate + H2O
Ortholog
N0.HOG0001527 threonylcarbamoyl-AMP synthase
KEGG gene
K07566 tsaC, rimN, SUA5, YRDC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
Gene Ontology
GO:1901363 heterocyclic compound binding
Gene Ontology
GO:1901360 organic cyclic compound metabolic process
Gene Ontology
GO:0097159 organic cyclic compound binding
Gene Ontology
GO:0090304 nucleic acid metabolic process
Gene Ontology
GO:0071704 organic substance metabolic process
Gene Ontology
GO:0070525 tRNA threonylcarbamoyladenosine metabolic process
Gene Ontology
GO:0065008 regulation of biological quality
Gene Ontology
GO:0065007 biological regulation
Gene Ontology
GO:0046483 heterocycle metabolic process
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0044238 primary metabolic process
Gene Ontology
GO:0044237 cellular metabolic process
Gene Ontology
GO:0043412 macromolecule modification
Gene Ontology
GO:0043170 macromolecule metabolic process
Gene Ontology
GO:0040007 growth
Gene Ontology
GO:0034660 ncRNA metabolic process
Gene Ontology
GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
GO:0034470 ncRNA processing
Gene Ontology
GO:0016779 nucleotidyltransferase activity
Gene Ontology
GO:0016772 transferase activity, transferring phosphorus-containing groups
Gene Ontology
GO:0016740 transferase activity
Gene Ontology
GO:0016070 RNA metabolic process
Gene Ontology
GO:0010467 gene expression
Gene Ontology
GO:0009987 cellular process
Gene Ontology
GO:0009451 RNA modification
Gene Ontology
GO:0008152 metabolic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0008033 tRNA processing
Gene Ontology
GO:0006807 nitrogen compound metabolic process
Gene Ontology
GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
GO:0006450 regulation of translational fidelity
Gene Ontology
GO:0006400 tRNA modification
Gene Ontology
GO:0006399 tRNA metabolic process
Gene Ontology
GO:0006396 RNA processing
Gene Ontology
GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005575 cellular_component
Gene Ontology
GO:0005488 binding
Gene Ontology
GO:0003824 catalytic activity
Gene Ontology
GO:0003723 RNA binding
Gene Ontology
GO:0003676 nucleic acid binding
Gene Ontology
GO:0003674 molecular_function
Gene Ontology
GO:0002949 tRNA threonylcarbamoyladenosine modification
Gene Ontology
GO:0000049 tRNA binding
Eggnog Protein
EP:ywlC
Eggnog Ortholog
EO:COG0009
Eggnog Description
ED:Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
EC Number
EC:2.7.7.87 L-threonylcarbamoyladenylate synthase; yrdC (gene name); Sua5; ywlC (gene name); ATP:L-threonyl,bicarbonate adenylyltransferase

Sequences

Nucleotide sequence (GC-content: 71.2 %):

ATGACAGACATGGATGCGAGCGAACACATCGACCCCGACCCGACAGGATCGGAGTCGCCCCAGCAGGATCTCGAGCCGGGCCTGACCCCGGAGATCGTCGACATCACCGACCCTCAGCAGCGGCCGGAGGCGCTGCGACGCGCGGCCGCCCTGCTCAAGGAGGGGGAGTGCGTCGTGCTGCCGACCGACACCGTCTACGGGATCGGCGCTGACGCACTGGATCCGATAGCCGTCCAGCGGCTGCTGATGGCCAAGGGTCGCGGACGCGACATGCCCCCGCCGGTCCTCATCGGCGACGCGGCCGTGCTGCCGGCGCTGTGCGACCGGGTGCCCGATGCGGCGAAGGCGCTGGCCGACGCCCACTGGCCGGGCGGGTTGACCCTCATCTTCCATGCCCAGCAGGACCTCACGATGGACCTGGGTGAGACCAACGGGACCATCGCGGTGCGGGTCCCCGACCAGGACGCGACCCGCCAGCTGCTGCGCATCACCGGGCCGCTGGCGGTCAGCAGCGCCAACAAGTCCGGATCACCCGCGGCGCTGACCGCTCAGAACGCCGCCGACCAGCTCGGCATCTCGGTGGCTCTCTACCTCGACGGTGGCCCCTCGCGCATCGGGGAGGCCTCGACGATCATCGACTTCGCCTCCGGTGACGAGGGAAAGGTGCTGCGCCAGGGCGCGCTGTCCATCGAGGACATCCACCTCATCGCACCCGATGTCGTCCCCCTCGCCCAGCCCGAGACGCCGGACCCGGCACCGGAGACCGACCCGGAACCCGCCGACGGGCCGAGCCAGGACGCCGACCCGGTCACCACCGACCAGCCCACCGGCTCGACCGAGTAG

Protein sequence:

MTDMDASEHIDPDPTGSESPQQDLEPGLTPEIVDITDPQQRPEALRRAAALLKEGECVVLPTDTVYGIGADALDPIAVQRLLMAKGRGRDMPPPVLIGDAAVLPALCDRVPDAAKALADAHWPGGLTLIFHAQQDLTMDLGETNGTIAVRVPDQDATRQLLRITGPLAVSSANKSGSPAALTAQNAADQLGISVALYLDGGPSRIGEASTIIDFASGDEGKVLRQGALSIEDIHLIAPDVVPLAQPETPDPAPETDPEPADGPSQDADPVTTDQPTGSTE

GenBank Info

locus_tag - FAM19038-p1-1.1_002152
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070664.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - threonylcarbamoyl-AMP synthase
protein_id - extdb:FAM19038-p1-1.1_002152

Gene Locus

Located on scaffold FAM19038-p1-1_scf1


Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm

FAM19038-p1-1.1_002151
FAM19038-p1-1.1_002153