update range to 10000 bp
locus tag: FAM19038-p1-1.1_002196 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Product
 threonine--tRNA ligase
KEGG reaction
 R03663 L-Threonine:tRNA(Thr) ligase (AMP-forming); ATP + L-Threonine + tRNA(Thr) <=> AMP + Diphosphate + L-Threonyl-tRNA(Thr) kornec00970
Ortholog
 N0.HOG0001107 threonine--tRNA ligase
KEGG gene
 K01868 TARS, thrS; threonyl-tRNA synthetase [EC:6.1.1.3] kornec00970
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140101 catalytic activity, acting on a tRNA
Gene Ontology
 GO:0140098 catalytic activity, acting on RNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044267 -
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043604 amide biosynthetic process
Gene Ontology
 GO:0043603 cellular amide metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043043 peptide biosynthetic process
Gene Ontology
 GO:0043039 tRNA aminoacylation
Gene Ontology
 GO:0043038 amino acid activation
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0016875 ligase activity, forming carbon-oxygen bonds
Gene Ontology
 GO:0016874 ligase activity
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006518 peptide metabolic process
Gene Ontology
 GO:0006435 threonyl-tRNA aminoacylation
Gene Ontology
 GO:0006418 tRNA aminoacylation for protein translation
Gene Ontology
 GO:0006412 translation
Gene Ontology
 GO:0006399 tRNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004829 threonine-tRNA ligase activity
Gene Ontology
 GO:0004812 aminoacyl-tRNA ligase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:thrS
Eggnog Ortholog
 EO:COG0441
Eggnog Description
 ED:Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
EC Number
 EC:6.1.1.3 threonine---tRNA ligase; threonyl-tRNA synthetase; threonyl-transfer ribonucleate synthetase; threonyl-transfer RNA synthetase; threonyl-transfer ribonucleic acid synthetase; threonyl ribonucleic synthetase; threonine-transfer ribonucleate synthetase; threonine translase; threonyl-tRNA synthetase; TRS kornec00970

Occurs in the following pathway maps:

Pathway Description
kornec00970 Aminoacyl-tRNA biosynthesis

Sequences

Nucleotide sequence (GC-content: 66.6 %):

GTGTCCTTCACCATCACCGTTCAGCGATCCGGAGATTCCGAGGAGCGACAGGTGGACACTACGACGACCGGCCTCGACCTGTTCGGATCTGATCGTTCCGTCGTCGCGATGAGGGTCGACGGCGAGCTCGAGGACCTTCAGCGCCCGATCAGCCAGGACGCCACCGTCGAGGCGGTGGAGGCCACCAGTCCCGACGGCCTCAACATCATCCGTCACTCGGCCACCCACGTGATGGCCCAGGCCGTCCAGCAGGTCTTCCCCGAGGTCAACCTGGGGATCGGCCCCTTCATCACCGACGGCTTCTACTACGACTTCGGAAACATCGATCCCGTGACCCCCGAGCTGCTCAAGGATCTCGAGAAGCGGATGAAGAAGATCGTCAAGGAGAACCAGCGGTTCGTGCGGCGTCCGGTGACCGAGGAGGAGGCCCGCCGCGAGCTCGCCGACCAGCCGTACAAGCTGGAACTGGTCGACTCCAAGGGCGGCCACGAGGCCGAGGGCGCCTCGGTGGAGGTCGGCGGCTCCGAGCTGACGATCTACGACAACGTGCGGCGCGACGGCGAGACCGCCTGGAAGGACCTGTGCCGCGGACCCCATGTGCCCTCCACCAAGTACCTGGGCAACGGGTTCGCGCTCACGAAGTCCTCGGCGGCCTACTGGAAGGGCGACCAGGCCAACGATCAGCTGCAGCGGGTCTACGGCACCGCCTGGGCCTCCAAGGACGATCTGGTGGCCTACCAGACCCAGATGGCCGAGGCGGCCCGCCGCGATCACCGCAAGCTGGGTGCCGAGCTGGACCTGTTCAGCTTCCCCGAGGAGATCGGGCCCGGGCTGGCGGTGTTCCACCCCAAGGGAGGGATGCTGCGCCACATCATCGAGGACTTCATCATCTCCGAGCACCTCAAGCGCGGATTCGACATCGTCTACACCCCTGAGATCACCAAGGGCGGCGTCTTCCACACCTCGGGTCACCTGCCCCACTACGCCGAGACGATGTTCCCCCCGATGAACGTCGATGAGGAGCGCGACGACCAGGGCAACATCACCCGCGCCGGCCAGGAGTACTACCTCAAGGCGATGAACTGCCCGATGCAGAACCTCATCTACAAGTCCCGGGGTCGCTCCTACCGGGATCTGCCGATCAAACTGTTCGAGATGGGCCACGACTACCGCTACGAGAAGTCCGGGGTTGTCCAGGGGCTGACCCGGATGCGCGGGTTCACCCAGGACGACTCGCACATCTACTGCACCCCCGAGCAGGCTCCCGAGGTCATCAAGAACCTTCTCGGGTTCTTCGACGAGGTGCTCTCGGCCTTCGGACTGGGGGAGTTCTACCTCGAGCTGTCGACCCGTGACGCCGAGGGCAAGAACCAGGACAAGTTCATCGGCTCGAACGAGGACTGGGCCGAGGCCACCCGGATCCTGCAGGAGGTCTGCGAGTCCAGCGGACTGGACCTGGTGCCCGACCCGGGCGGCGCGGCGTTCTACGGCCCGAAGGTCTCGGTCCAGGCCAAGGACGCCATCGGACGCACCTGGCAGATGTCGACGGTCCAGTACGACTTCAACCAGCCGGAGCGGTTCAAGCTGGAGTACACCGCTCCCGACGGCAGCCGCCGGCGTCCGGTGATGATCCACTCCGCCAAGCTCGGCTCCGTCGAGCGGTTCATCGGAGTCCTCACCGAGCACTACGCGGGAGCCTTCCCGGTGTGGTTGTCGCCGGTCCAGGTCCACGCCGTCCCGGTCGCCGAGGAGTTCGACTCCTACCTGGACGGACTGGCCGCCCGGCTGCGCGCCGCCGAGCTGCGTGTGGAGATCGACAAGTCCACCGACCGGTTCGGCAAGAAGATCCGCAACGCCACCCAGACCCGGTCGCCGTTCATCGTGATCGCCGGCGGCGAGGACGTCGCGGCGTGGGCGGTCTCCTTCCGCTTCCGCGACGGCTCGCAGCTCAACGGGGTCCCGATGGACCGGGCGGTCGCCATCATCGACGGCTGGGCCAGGGCCAGGCGCAACGACGACCCGACCGCCGCCAACGCGGAGTCGGTGCTCGGCCAGTCCGAGGCCTGA

Protein sequence:

MSFTITVQRSGDSEERQVDTTTTGLDLFGSDRSVVAMRVDGELEDLQRPISQDATVEAVEATSPDGLNIIRHSATHVMAQAVQQVFPEVNLGIGPFITDGFYYDFGNIDPVTPELLKDLEKRMKKIVKENQRFVRRPVTEEEARRELADQPYKLELVDSKGGHEAEGASVEVGGSELTIYDNVRRDGETAWKDLCRGPHVPSTKYLGNGFALTKSSAAYWKGDQANDQLQRVYGTAWASKDDLVAYQTQMAEAARRDHRKLGAELDLFSFPEEIGPGLAVFHPKGGMLRHIIEDFIISEHLKRGFDIVYTPEITKGGVFHTSGHLPHYAETMFPPMNVDEERDDQGNITRAGQEYYLKAMNCPMQNLIYKSRGRSYRDLPIKLFEMGHDYRYEKSGVVQGLTRMRGFTQDDSHIYCTPEQAPEVIKNLLGFFDEVLSAFGLGEFYLELSTRDAEGKNQDKFIGSNEDWAEATRILQEVCESSGLDLVPDPGGAAFYGPKVSVQAKDAIGRTWQMSTVQYDFNQPERFKLEYTAPDGSRRRPVMIHSAKLGSVERFIGVLTEHYAGAFPVWLSPVQVHAVPVAEEFDSYLDGLAARLRAAELRVEIDKSTDRFGKKIRNATQTRSPFIVIAGGEDVAAWAVSFRFRDGSQLNGVPMDRAVAIIDGWARARRNDDPTAANAESVLGQSEA

GenBank Info

locus_tag - FAM19038-p1-1.1_002196
EC_number - 6.1.1.3
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070366.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - threonine--tRNA ligase
protein_id - extdb:FAM19038-p1-1.1_002196

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002195
FAM19038-p1-1.1_002197