Annotations

Type Name Description Pathways
KEGG reaction
R08549 2-oxoglutarate:NAD+ 2-oxidoreductase (CoA-succinylating); 2-Oxoglutarate dehydrogenase complex; 2-Oxoglutarate + CoA + NAD+ <=> Succinyl-CoA + CO2 + NADH + H+ kornec01100kornec01110kornec01120kornec01200
KEGG reaction
R07618 enzyme N6-(dihydrolipoyl)lysine:NAD+ oxidoreductase; Enzyme N6-(dihydrolipoyl)lysine + NAD+ <=> Enzyme N6-(lipoyl)lysine + NADH + H+ kornec00010kornec00020kornec00280kornec00620kornec00640kornec01100kornec01110kornec01240
KEGG reaction
R03815 dihydrolipoylprotein:NAD+ oxidoreductase; Dihydrolipoylprotein + NAD+ <=> Lipoylprotein + NADH + H+ kornec00260
KEGG reaction
R01698 Dihydrolipoamide:NAD+ oxidoreductase; Dihydrolipoamide + NAD+ <=> Lipoamide + NADH + H+
KEGG reaction
R01221 glycine:NAD+ 2-oxidoreductase (tetrahydrofolate-methylene-adding); glycine cleavage system; Glycine + Tetrahydrofolate + NAD+ <=> 5,10-Methylenetetrahydrofolate + Ammonia + CO2 + NADH + H+ kornec00630kornec01100kornec01110kornec01200
KEGG reaction
R00209 pyruvate:NAD+ 2-oxidoreductase (CoA-acetylating); pyruvate dehydrogenase complex; Pyruvate + CoA + NAD+ <=> Acetyl-CoA + CO2 + NADH + H+ kornec01100kornec01110kornec01120kornec01200
Ortholog
N0.HOG0000529 dihydrolipoyl dehydrogenase
Gene Code
lpdA
KEGG gene
K00382 DLD, lpd, pdhD; dihydrolipoamide dehydrogenase [EC:1.8.1.4] kornec00010kornec00020kornec00260kornec00280kornec00310kornec00380kornec00620kornec00630kornec00640kornec01100kornec01110kornec01120kornec01200kornec01240
Gene Ontology
GO:1990204 oxidoreductase complex
Gene Ontology
GO:1902494 catalytic complex
Gene Ontology
GO:1901363 heterocyclic compound binding
Gene Ontology
GO:1901265 nucleoside phosphate binding
Gene Ontology
GO:0097159 organic cyclic compound binding
Gene Ontology
GO:0071944 cell periphery
Gene Ontology
GO:0070404 NADH binding
Gene Ontology
GO:0065008 regulation of biological quality
Gene Ontology
GO:0065007 biological regulation
Gene Ontology
GO:0055114 obsolete oxidation-reduction process
Gene Ontology
GO:0051287 NAD binding
Gene Ontology
GO:0050794 regulation of cellular process
Gene Ontology
GO:0050789 regulation of biological process
Gene Ontology
GO:0050662 obsolete coenzyme binding
Gene Ontology
GO:0050660 flavin adenine dinucleotide binding
Gene Ontology
GO:0048037 obsolete cofactor binding
Gene Ontology
GO:0045454 cell redox homeostasis
Gene Ontology
GO:0045254 pyruvate dehydrogenase complex
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044444 obsolete cytoplasmic part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0043168 anion binding
Gene Ontology
GO:0043167 ion binding
Gene Ontology
GO:0042592 homeostatic process
Gene Ontology
GO:0040007 growth
Gene Ontology
GO:0036094 small molecule binding
Gene Ontology
GO:0035375 zymogen binding
Gene Ontology
GO:0032991 protein-containing complex
Gene Ontology
GO:0019899 enzyme binding
Gene Ontology
GO:0019725 cellular homeostasis
Gene Ontology
GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
Gene Ontology
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors
Gene Ontology
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
Gene Ontology
GO:0016651 oxidoreductase activity, acting on NAD(P)H
Gene Ontology
GO:0016491 oxidoreductase activity
Gene Ontology
GO:0016020 membrane
Gene Ontology
GO:0015036 disulfide oxidoreductase activity
Gene Ontology
GO:0009987 cellular process
Gene Ontology
GO:0008152 metabolic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0005886 plasma membrane
Gene Ontology
GO:0005829 cytosol
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005576 extracellular region
Gene Ontology
GO:0005575 cellular_component
Gene Ontology
GO:0005515 protein binding
Gene Ontology
GO:0005488 binding
Gene Ontology
GO:0004148 dihydrolipoyl dehydrogenase activity
Gene Ontology
GO:0003824 catalytic activity
Gene Ontology
GO:0003674 molecular_function
Gene Ontology
GO:0000166 nucleotide binding
Eggnog Protein
EP:lpd
Eggnog Ortholog
EO:COG1249
Eggnog Description
ED:Pyridine nucleotide-disulphide oxidoreductase
EC Number
EC:1.8.1.4 dihydrolipoyl dehydrogenase; LDP-Glc; LDP-Val; dehydrolipoate dehydrogenase; diaphorase; dihydrolipoamide dehydrogenase; dihydrolipoamide:NAD+ oxidoreductase; dihydrolipoic dehydrogenase; dihydrothioctic dehydrogenase; lipoamide dehydrogenase (NADH); lipoamide oxidoreductase (NADH); lipoamide reductase; lipoamide reductase (NADH); lipoate dehydrogenase; lipoic acid dehydrogenase; lipoyl dehydrogenase; protein-6-N-(dihydrolipoyl)lysine:NAD+ oxidoreductase kornec00010kornec00020kornec00260kornec00280kornec00310kornec00380kornec00620kornec00640kornec01100kornec01110kornec01120
Gene Product
dihydrolipoyl dehydrogenase

Occurs in the following pathway maps:

Pathway Description
kornec00010 Glycolysis / Gluconeogenesis
kornec00020 Citrate cycle (TCA cycle)
kornec00260 Glycine, serine and threonine metabolism
kornec00280 Valine, leucine and isoleucine degradation
kornec00310 Lysine degradation
kornec00380 Tryptophan metabolism
kornec00620 Pyruvate metabolism
kornec00630 Glyoxylate and dicarboxylate metabolism
kornec00640 Propanoate metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01200 Carbon metabolism
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 65.7 %):

ATGACCTCACACTTCGACGTCGTTGTCCTTGGTGCCGGCCCCGGCGGCTATGTGGCAGCGATTCGCGCAGCACAGCTCGGCAAGAAGACCGCCATCATCGAGAAGGAGTACTGGGGCGGGGTGTGTCTCAACGTCGGCTGCATCCCGACCAAGTCCCTGCTTCGCAACGCCGAACTGGCCAACATCGTCACCCGCGAGGCCGACACCTTCGGGATCTCCGGTGAGGTCTCGGTGGACTACAAGAAGGCCTTCTCCCGCTCACGGGCGGTCTCCAAGCGGATGGTCAACGGCATCCACTTCCTCATGAAGAAGAACAAGATCACCGAGTTCAACGGGTGGGGGGAGTTCACCGGCCCCAGGACGGTGGTCGTCAAGGATGACGGCGGTGCGGTGAGCGAGGAGATCACCTTCGACAACTGCATCATCGCCGCCGGCTCTGTTGTCAAGACGCTGCGCGGCACCGAACTGTCCGAGCGGGTGGTCACCTACAAGGAGCAGATCCTCTCCGAGTCCGTCCCGCAGTCGATCGTGATCGCCGGCTCCGGGGCGATCGGCACCGAGTTCGCCTACGTGCTGGCCGCCTACGGCACCAAGGTCACCATCGTCGAGTTCCTCGACCGGATCGTCCCCAATGAGGACAAGGAGATCAGCGCCGAGCTCGCCAAGGCCTACAAGAAGCTCGGGGTGAGTGTTCTCACCTCCACCAAGGTCGACGCCATCGACGACTCGGGGGAGAAGGTCAAGGTCACCGTCTCGCCGGCTGCCGGGGGCCAGGCCCAGGTGCTGGAGACCGATCGGGTGCTCCAGGCCGTCGGCTTCGCCCCGCGCACCGAGGGATTCGGGCTGGATAAGACCGGGGTCACGCTCACCGACCGGGGCGCCATCGCCATCGACGAGTACATGCGCACCAATGTGCCGGGCATCTACGCGATCGGGGACTGCACCGCCAAGCTGATGCTCGCCCACACCGCGGAGGCTCAGGGGGTGGTGGCCGCCGAGACCATCGCGGGGGCCGAGACGATGCCGATCAACTACGACATGATCCCGCGCGCCACCTACTGCCAGCCCCAGATCGGGTCCTTCGGGTACACCGAGGCCCAGGCCAAGGAGAAGGGCTACGACGTCACGGTGAGCAAGTTCCCGTTCGCCGCCAACGGCAAGGCCTGGGGCCTGGGGGATGCCACCGGTTTCGTCAAGATCGTCGCCGACTCCCGGCACGGCGAGCTGCTGGGTGCCAGCCTGATCGGCCCCGACGTCTCCGAGCTGCTCCCGGAGCTGACCCTGGCGCAGCTGTGGGACATCACCGCCGAGGAGATCGGCCGCAACATTCACGCGCACCCGTCCCTGTCGGAGGCCCTCAAGGACGCCGCGGAAGGTATCGGCGGCCACATGATCAACTTCTGA

Protein sequence:

MTSHFDVVVLGAGPGGYVAAIRAAQLGKKTAIIEKEYWGGVCLNVGCIPTKSLLRNAELANIVTREADTFGISGEVSVDYKKAFSRSRAVSKRMVNGIHFLMKKNKITEFNGWGEFTGPRTVVVKDDGGAVSEEITFDNCIIAAGSVVKTLRGTELSERVVTYKEQILSESVPQSIVIAGSGAIGTEFAYVLAAYGTKVTIVEFLDRIVPNEDKEISAELAKAYKKLGVSVLTSTKVDAIDDSGEKVKVTVSPAAGGQAQVLETDRVLQAVGFAPRTEGFGLDKTGVTLTDRGAIAIDEYMRTNVPGIYAIGDCTAKLMLAHTAEAQGVVAAETIAGAETMPINYDMIPRATYCQPQIGSFGYTEAQAKEKGYDVTVSKFPFAANGKAWGLGDATGFVKIVADSRHGELLGASLIGPDVSELLPELTLAQLWDITAEEIGRNIHAHPSLSEALKDAAEGIGGHMINF

GenBank Info

gene - lpdA
locus_tag - FAM19038-p1-1.1_002227
EC_number - 1.8.1.4
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002536884.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - dihydrolipoyl dehydrogenase
protein_id - extdb:FAM19038-p1-1.1_002227

Gene Locus

Located on scaffold FAM19038-p1-1_scf1


Cellular location expand

Responsible annotations:
SL-0243: GO:0005576 extracellular region
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane

FAM19038-p1-1.1_002226
FAM19038-p1-1.1_002228