update range to 10000 bp
locus tag: FAM19038-p1-1.1_002263 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 rocD
KEGG reaction
 R00667 L-Ornithine:2-oxo-acid aminotransferase; L-Ornithine + 2-Oxoglutarate <=> L-Glutamate 5-semialdehyde + L-Glutamate kornec00330kornec01100kornec01110
Gene Product
 ornithine--oxo-acid transaminase
Ortholog
 N0.HOG0001507 acetylornithine transaminase
KEGG gene
 K00819 rocD, OAT; ornithine--oxo-acid transaminase [EC:2.6.1.13] kornec00330kornec01100kornec01110
Eggnog Protein
 EP:rocD
Eggnog Ortholog
 EO:COG4992
Eggnog Description
 ED:Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
EC Number
 EC:2.6.1.13 ornithine aminotransferase; ornithine delta-transaminase; L-ornithine:alpha-ketoglutarate delta-aminotransferase; OAT; L-ornithine 5-aminotransferase; L-ornithine aminotransferase; ornithine 5-aminotransferase; ornithine transaminase; ornithine-alpha-ketoglutarate aminotransferase; ornithine-2-oxoacid aminotransferase; ornithine-keto acid aminotransferase; ornithine-keto acid transaminase; ornithine-ketoglutarate aminotransferase; ornithine-oxo acid aminotransferase; ornithine:alpha-oxoglutarate transaminase; ornithine---oxo-acid transaminase kornec00330kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00330 Arginine and proline metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites

Sequences

Nucleotide sequence (GC-content: 70.0 %):

ATGGCCACTGATTCCGCCTCGGCCTGCATCAGGCAGACCGAGCGTTTTGGAGCTCACAACTATCAGCCGTTGCCGGTGGTGATCGCCTCGGGACAGGGAGCCTGGGTCCTCGATGTCGAGGGCCGCAGGTACCTGGACTGTCTGGCTGCCTACTCGGCGCTCAACTTCGGTCACCGCCACCCCGCACTGGTCGCCGCGGCCCACGCCCAGCTCGACCGCCTCACCCTCACCAGTCGCGCCTTCCACAACGACCGGCTGGGCGAGTTCATGGAGCGCCTCGCCACACTGGCGGGCACCCAGATGGTGCTCCCGATGAACACCGGCGCCGAGGCGGTGGAGTCGGCGATCAAGGTGGCCAGGGCCTGGGGCTACCGGGTCAAGGGGGTGCCGACCGACCGGGCCAGGATCATCGTCGCCGCCAACAACTTCCACGGCCGCACCACCACCATCGTCGGATTCTCGAGCGATCCGAGCGCCCGGGACGGTTTCGGACCCTTCACCCCCGGTTTCGACACCGTCCCCTACGGGGACGCCGAGGCGCTGGCCGCGGCGATCACCCCCGAGACGGTCGCCGTCCTCATCGAACCGATCCAGGGCGAGGCCGGCGTCATCCTGCCTCCGGAGGGCTACCTGGCCCAGGTGCGCCGACTGACCACCGAGCACGGGGTGCTGTTCATCGCCGACGAGATCCAGTCGGGGCTGGGACGCACCGGCGCCACCTTCGAGTGCGACAACGCCGGGGTGCGTCCGGACCTCTACCTGCTCGGCAAGGCGCTGGGTGGAGGGATCGTCCCGGTCAGTGCGGTGGTCGGGGAGTCCTCGGTGCTCGGGGTGCTCAGACCCGGGGAGCACGGCTCGACCTTCGGCGGCAACCCGTTGGCCGCGGCCGTCGGCATCGCCGTGGTCGACCTGTTGGAGACCGGCGAGTACCAGTCGCGGGCGCGCGAGCTGGGAGCGGTGCTGGGTCGGCGTCTCGAGGAGCTGGTGGGCGCCGGGGTGCAGTCGGTGCGGGTGCGCGGCATGTGGGCCGGGGTCGACATCGATCCGGACCTGGCGACCGGACACCGGGTCTGCGAACTGCTGGCCGAGCGCGGAGTGCTGGCCAAGGAGACCCATGGCTCGACGATCCGTCTGGCTCCCCCGCTGGTGATCACCGCCGAGGAGATCGACTGGGCGATCGACCAGCTGAGAGAGGTCCTGGCCGAGCTGTCATGA

Protein sequence:

MATDSASACIRQTERFGAHNYQPLPVVIASGQGAWVLDVEGRRYLDCLAAYSALNFGHRHPALVAAAHAQLDRLTLTSRAFHNDRLGEFMERLATLAGTQMVLPMNTGAEAVESAIKVARAWGYRVKGVPTDRARIIVAANNFHGRTTTIVGFSSDPSARDGFGPFTPGFDTVPYGDAEALAAAITPETVAVLIEPIQGEAGVILPPEGYLAQVRRLTTEHGVLFIADEIQSGLGRTGATFECDNAGVRPDLYLLGKALGGGIVPVSAVVGESSVLGVLRPGEHGSTFGGNPLAAAVGIAVVDLLETGEYQSRARELGAVLGRRLEELVGAGVQSVRVRGMWAGVDIDPDLATGHRVCELLAERGVLAKETHGSTIRLAPPLVITAEEIDWAIDQLREVLAELS

GenBank Info

gene - rocD
locus_tag - FAM19038-p1-1.1_002263
EC_number - 2.6.1.13
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070434.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ornithine--oxo-acid transaminase
protein_id - extdb:FAM19038-p1-1.1_002263

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

FAM19038-p1-1.1_002262
FAM19038-p1-1.1_002264