Annotations

Type Name Description Pathways
KEGG reaction
R09365 5-methyltetrahydropteroyltri-L-glutamate:L-selenohomocysteine Se-methyltransferase; Selenohomocysteine + 5-Methyltetrahydropteroyltri-L-glutamate <=> L-Selenomethionine + Tetrahydropteroyltri-L-glutamate kornec00450kornec01100
KEGG reaction
R00946 5-methyltetrahydrofolate:L-homocysteine S-methyltransferase; 5-Methyltetrahydrofolate + L-Homocysteine <=> Tetrahydrofolate + L-Methionine kornec00270kornec00670kornec01100kornec01110kornec01230
Ortholog
N0.HOG0001688 methionine synthase
Gene Product
methionine synthase
Gene Code
metH
KEGG gene
K00548 metH, MTR; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] kornec00270kornec00450kornec00670kornec01100kornec01110kornec01230
Gene Ontology
GO:1901607 alpha-amino acid biosynthetic process
Gene Ontology
GO:1901605 alpha-amino acid metabolic process
Gene Ontology
GO:1901576 organic substance biosynthetic process
Gene Ontology
GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
GO:1901564 organonitrogen compound metabolic process
Gene Ontology
GO:0071944 cell periphery
Gene Ontology
GO:0071704 organic substance metabolic process
Gene Ontology
GO:0046394 carboxylic acid biosynthetic process
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044444 obsolete cytoplasmic part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0044283 small molecule biosynthetic process
Gene Ontology
GO:0044281 small molecule metabolic process
Gene Ontology
GO:0044272 sulfur compound biosynthetic process
Gene Ontology
GO:0044249 cellular biosynthetic process
Gene Ontology
GO:0044238 primary metabolic process
Gene Ontology
GO:0044237 cellular metabolic process
Gene Ontology
GO:0043436 oxoacid metabolic process
Gene Ontology
GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity
Gene Ontology
GO:0032259 methylation
Gene Ontology
GO:0030312 external encapsulating structure
Gene Ontology
GO:0019752 carboxylic acid metabolic process
Gene Ontology
GO:0016741 transferase activity, transferring one-carbon groups
Gene Ontology
GO:0016740 transferase activity
Gene Ontology
GO:0016053 organic acid biosynthetic process
Gene Ontology
GO:0016020 membrane
Gene Ontology
GO:0009987 cellular process
Gene Ontology
GO:0009086 methionine biosynthetic process
Gene Ontology
GO:0009067 aspartate family amino acid biosynthetic process
Gene Ontology
GO:0009066 aspartate family amino acid metabolic process
Gene Ontology
GO:0009058 biosynthetic process
Gene Ontology
GO:0008705 methionine synthase activity
Gene Ontology
GO:0008652 cellular amino acid biosynthetic process
Gene Ontology
GO:0008172 S-methyltransferase activity
Gene Ontology
GO:0008168 methyltransferase activity
Gene Ontology
GO:0008152 metabolic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0006807 nitrogen compound metabolic process
Gene Ontology
GO:0006790 sulfur compound metabolic process
Gene Ontology
GO:0006555 methionine metabolic process
Gene Ontology
GO:0006520 cellular amino acid metabolic process
Gene Ontology
GO:0006082 organic acid metabolic process
Gene Ontology
GO:0005886 plasma membrane
Gene Ontology
GO:0005829 cytosol
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005618 cell wall
Gene Ontology
GO:0005575 cellular_component
Gene Ontology
GO:0003824 catalytic activity
Gene Ontology
GO:0003674 molecular_function
Gene Ontology
GO:0000097 sulfur amino acid biosynthetic process
Gene Ontology
GO:0000096 sulfur amino acid metabolic process
Eggnog Protein
EP:metH
Eggnog Ortholog
EO:COG0646
Eggnog Description
ED:Methionine synthase
EC Number
EC:2.1.1.13 methionine synthase; 5-methyltetrahydrofolate---homocysteine S-methyltransferase; 5-methyltetrahydrofolate---homocysteine transmethylase; N-methyltetrahydrofolate:L-homocysteine methyltransferase; N5-methyltetrahydrofolate methyltransferase; N5-methyltetrahydrofolate-homocysteine cobalamin methyltransferase; N5-methyltetrahydrofolic---homocysteine vitamin B12 transmethylase; B12 N5-methyltetrahydrofolate homocysteine methyltransferase; methyltetrahydrofolate---homocysteine vitamin B12 methyltransferase; tetrahydrofolate methyltransferase; tetrahydropteroylglutamate methyltransferase; tetrahydropteroylglutamic methyltransferase; vitamin B12 methyltransferase; cobalamin-dependent methionine synthase; methionine synthase (cobalamin-dependent); MetH kornec00270kornec00450kornec00670kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00270 Cysteine and methionine metabolism
kornec00450 Selenocompound metabolism
kornec00670 One carbon pool by folate
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 70.4 %):

ATGACTTCGGCTCTTCGCTCCGCGCTGGGATCTCGACTTCTCATCCTGGACGGTGCGATGGGCACCATGTTGCAGGCCGCGGATCTGTCCCTCGACGACTTCGACGGCCTCGAGGGCTGCAACGAGATCCTCAACGTCACCCGGCCCGACGTCATTTCCGAGATCCATGACCGCTACCTGGCCGCCGGCGCCGATCTCATCGAGACCAACACCTTCGGTGCCAACCTGTCGGCGCTGGGGGAGTACGACATCGCCGAGCGGGCCGTCGAGCTCGCCGGGGCGGCCACCCGGCTCGCCCGCCGGGCCGCCGATGCCGCCAGCACCCCCGACCGGCCGCGATTCGTCGTCGGATCGGTGGGCCCGGGCACCAAGCTGCCCACCCTGGGCCACATCGCCTTCGCCGCGATCCGCGACGTCTACCAGCAGACCATCGAGGCGATGATCGACGAGGGGGCCGACGCCGTCCAGATCGAGACCTGCCAGGACCTCCTGCAGGCCAAGGCCGCGGTGATCGGAGCCCACCGGGCCGCCGCCGCCCGCGGCGTCGACCTTCCGGTGATGGTCGACATCACGGTGGAGACCACCGGCACCATGCTGCTGGGATCGGAGACCGGGGCCGCCCTCACCGTCCTGGAGCCCCTCGGCATCGACGCCATCGGGATGAACTGCGCCACCGGTCCCGCCGAGATGGCCGAGCATCTGCGCACCCTGTCGGGGGCCGCCCGGGTCCCGGTGACCTGCATGCCCAACGCCGGTCTTCCCGTCATCACCGGGGAGGGTGCCCGCTACCCGCTGGGCCCCGAAGATCTCACCGAGGCCCTCACCGACTACGCCCAGCGGTTCGGCCTGTCGGTGGTCGGCGGCTGCTGCGGCACCACCCCCGAACACATCGCGATGGTCTCGGCGGCCCTGGCCGGACGCCCGGTGGCGCCTCGTCACCCGGTGCACGTCGACGCCGTCGCCAGCCTGTACTCCGAGGTGCCGCTGTCCCAGGACACCGCCTACCTGGCGATCGGTGAGCGCACCAACGCCAACGGCTCCAAGGCCTTCCGCGAGGCGATGCTGGCGGAGAACTGGGACGAGTGCATCGACATCGCCAAGACCCAGACCCGCGACGGCGCCCACCTGCTGGACCTGTGCGTCGACTACGTCGGCCGCGACGGGACCGCCGACATGGCCACCCTGGCCGCCCGGATGTCGACCGCCGTCACCCTTCCGGTGGTCCTGGACTCCACCGAGCCGCAGGTGCTGCGAACCGGCCTGGAGCACCTGGCGGGACGCTGCATCATCAACTCGGTGAACTTCGAGGACGGCGACGGGCCCGAGTCCCGCTACCAGCGGGTGATGCCCCTGGTCCGCGAGCACGGCGCCGGGGTGGTGGCGCTGACCATCGACGAGGAGGGCCAGGCCCGCACCCGGGAGTGGAAGGTCCGGGTGGCCTCCCGTCTCATCGACGACCTGGTCGGCCGGTGGGGGATGGAGGTCGGCGACATCCTGGTGGACTGCCTCACCTTCCCGATCGCCACCGGCCAGCAGGAGACCCGTCGCGACGGGGTGGAGACCATCGAGGCGATCCGCGAGCTCAAGAGCCGGTACCCGGGGGTGCGCACCACCCTGGGGGTCTCCAACATCTCCTTCGGACTCAACCCGGCCGCCCGCATCGTGCTCAACTCGGTGTTCCTGCACGAGGCGGTGGAGGCCGGCCTGGACTCCGCCATCGTCCACGCCGCCAAGATCCTGCCGATCGACCGGATCCCCGAGGAGCAGCGGGAGGTGGCCCTGGACCTGGTCTGGGACCGCCGCGGCACCGACGCCCCGGCACCGCGCGGGGTGGAGGGCTACGACCCGCTGACCCGCTTCCTGGAACTCTTCGAGGGAGTGACGGCGGCCTCGATGAAGGCCGAGAGGGAGGCCGAGCTGGCCGCCATGCCGCTGCTGGAGCGGCTCAAGCAGCGCATCATCGACGGCAACGCGAAGGGGCTCATCGAGGACCTGGACGAGGCGCTGACCGTCAAGGGGGCCCTGGACATCGTCAACGAGGACCTGCTGGCCGGCATGCAGGTGGTCGGCGAGCTGTTCGGCTCGGGGCGGATGCAGCTGCCCTTCGTGCTGCAGTCGGCCGAGGTGATGAAGACCGCGGTCGCCCACCTGGAGCCGCACATGGAGAAGACCGATGCCGGCGGCAAGGGCACCCTGGTGCTCGCCACCGTCAAGGGGGACGTCCACGACATCGGCAAGAACCTCGTCGACATCATCGTCTCCAACAACGGCTACTCGGTGGTGAACCTGGGCATCAAGCAGCCGGTCCAGGCGATCATCCGGGCCGCCGAGGAGCACCACGCCGACGCCATCGGGATGTCGGGGCTGCTGGTGAAGTCCACCATGGTGATGCGCGACAACCTGCTGGAGCTCAACCGGGAGGGGCTGGCCCGCAACTACCCGGTGATGCTCGGCGGCGCCGCGCTCACCCGGTCCTACGTCGAGCACGACCTCAACGACCTGTTCGAGGGGGAGGTCCGCTACGCCAGGGACGCCTTCGAGGGACTGCGGCTGATGGACTCGGTGATGGCCGTCAAGCACGGCGTGCCCGGTTCCTCGCTGCCCGAGATCCGCGCCCGACGGGTCCCGGCCCGTCCCCGCGCCGGCTCTGCCGGTGGTGCCGAGGCCGCCACCTCCGGTGGGTCCGGGGAGTCGGGCGGGGCCGATCCGGCGCAGCCCGATGTCCGCTCCGATGTCGCCCGGCCCACCCCGGCCGGCGGTGTCGACGTCCCCACCCCGCCCTTCTGGGGGTCGCGGGTCACCAAGGGGATCGCCCTGGACGAGGTCACCCAGTGGCTCGACGAGAGGGCCACCTTCATGGGCCGGTGGGGGCTCAAGGGCAGTCGCACGGACGGCTCCTACGACCGGATGGTCCGTGACATCGGCCGGCCACGGCTGCGGATGCTGCTGGACAGGATCCGCGCCGAGAACCTGGCCCGGTTCGGGGTGGTGCACGGCTACTGGCCGGTGGTCGCCGAAGGCCGCCGACTCATCGTCCTGGACCCGGCCGACACCTCCCGGGAGCTCTCCCGCTTCGAGTTCCCCCGCCAGCACGGCGGACGCCGGCTGTGCCTGGCGGATTTCTTCCGCGACGCCGCCGAGGCCGCCGAGCTGGGCCCCGATGTCATCGCCTTCCAGCTGGTGACGATGGGACAGCAGGTGTCGAGGGCCACCGCCGAGCTCTTCGAGGCCAACTCCTACCGGGAGTACCTGGAACTGCACGGCCTGTCGGTGCAGCTGGCCGAGGCGCTGGCCGAGATGTGGCACCACCGGGTCCGTCAGGAGCTCGGCATCGCCGCCCCCCACGAGGACATCGCCGCGGCCATCGATCACCAGACCTACCGGGGCTGCCGGTACAGTTTCGGCTACGCCGCATGCCCCAATCTTGAGGATCGCGCCAAGCTCGCGGGTCTGCTGGATCCCGGCCGCATCGGCGTCGAGCTGTCGGAGGAGTTCCAGCTGCACCCGGAACAGTCCACCGATGCATTCGTCGTCCATCACCCGGAGGCCAGCTACTTCAATGCCAAATGA

Protein sequence:

MTSALRSALGSRLLILDGAMGTMLQAADLSLDDFDGLEGCNEILNVTRPDVISEIHDRYLAAGADLIETNTFGANLSALGEYDIAERAVELAGAATRLARRAADAASTPDRPRFVVGSVGPGTKLPTLGHIAFAAIRDVYQQTIEAMIDEGADAVQIETCQDLLQAKAAVIGAHRAAAARGVDLPVMVDITVETTGTMLLGSETGAALTVLEPLGIDAIGMNCATGPAEMAEHLRTLSGAARVPVTCMPNAGLPVITGEGARYPLGPEDLTEALTDYAQRFGLSVVGGCCGTTPEHIAMVSAALAGRPVAPRHPVHVDAVASLYSEVPLSQDTAYLAIGERTNANGSKAFREAMLAENWDECIDIAKTQTRDGAHLLDLCVDYVGRDGTADMATLAARMSTAVTLPVVLDSTEPQVLRTGLEHLAGRCIINSVNFEDGDGPESRYQRVMPLVREHGAGVVALTIDEEGQARTREWKVRVASRLIDDLVGRWGMEVGDILVDCLTFPIATGQQETRRDGVETIEAIRELKSRYPGVRTTLGVSNISFGLNPAARIVLNSVFLHEAVEAGLDSAIVHAAKILPIDRIPEEQREVALDLVWDRRGTDAPAPRGVEGYDPLTRFLELFEGVTAASMKAEREAELAAMPLLERLKQRIIDGNAKGLIEDLDEALTVKGALDIVNEDLLAGMQVVGELFGSGRMQLPFVLQSAEVMKTAVAHLEPHMEKTDAGGKGTLVLATVKGDVHDIGKNLVDIIVSNNGYSVVNLGIKQPVQAIIRAAEEHHADAIGMSGLLVKSTMVMRDNLLELNREGLARNYPVMLGGAALTRSYVEHDLNDLFEGEVRYARDAFEGLRLMDSVMAVKHGVPGSSLPEIRARRVPARPRAGSAGGAEAATSGGSGESGGADPAQPDVRSDVARPTPAGGVDVPTPPFWGSRVTKGIALDEVTQWLDERATFMGRWGLKGSRTDGSYDRMVRDIGRPRLRMLLDRIRAENLARFGVVHGYWPVVAEGRRLIVLDPADTSRELSRFEFPRQHGGRRLCLADFFRDAAEAAELGPDVIAFQLVTMGQQVSRATAELFEANSYREYLELHGLSVQLAEALAEMWHHRVRQELGIAAPHEDIAAAIDHQTYRGCRYSFGYAACPNLEDRAKLAGLLDPGRIGVELSEEFQLHPEQSTDAFVVHHPEASYFNAK

GenBank Info

gene - metH
locus_tag - FAM19038-p1-1.1_002304
EC_number - 2.1.1.13
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070462.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - methionine synthase
protein_id - extdb:FAM19038-p1-1.1_002304

Gene Locus

Located on scaffold FAM19038-p1-1_scf1


Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane

FAM19038-p1-1.1_002303
FAM19038-p1-1.1_002305