update range to 10000 bp
locus tag: FAM19038-p1-1.1_002309 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Product
 primosomal protein N'
Ortholog
 N0.HOG0001238 primosomal protein N'
KEGG gene
 K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] kornec03440
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140097 catalytic activity, acting on DNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071103 DNA conformation change
Gene Ontology
 GO:0070035 obsolete purine NTP-dependent helicase activity
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0051276 chromosome organization
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043140 -
Gene Ontology
 GO:0043138 3'-5' DNA helicase activity
Gene Ontology
 GO:0042623 -
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0032508 DNA duplex unwinding
Gene Ontology
 GO:0032392 DNA geometric change
Gene Ontology
 GO:0017111 ribonucleoside triphosphate phosphatase activity
Gene Ontology
 GO:0016887 ATP hydrolysis activity
Gene Ontology
 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Gene Ontology
 GO:0016817 hydrolase activity, acting on acid anhydrides
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016462 pyrophosphatase activity
Gene Ontology
 GO:0016043 cellular component organization
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008094 ATP-dependent activity, acting on DNA
Gene Ontology
 GO:0008026 -
Gene Ontology
 GO:0006996 organelle organization
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006310 DNA recombination
Gene Ontology
 GO:0006302 double-strand break repair
Gene Ontology
 GO:0006281 DNA repair
Gene Ontology
 GO:0006270 DNA replication initiation
Gene Ontology
 GO:0006268 DNA unwinding involved in DNA replication
Gene Ontology
 GO:0006261 DNA-templated DNA replication
Gene Ontology
 GO:0006260 DNA replication
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004386 helicase activity
Gene Ontology
 GO:0004003 -
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003678 DNA helicase activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:priA
Eggnog Ortholog
 EO:COG1198
Eggnog Description
 ED:Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex

Occurs in the following pathway maps:

Pathway Description
kornec03440 Homologous recombination

Sequences

Nucleotide sequence (GC-content: 74.7 %):

ATGACCGAGGCGCTGCTGGAACCCACCGAGTGGGTGGCCCACGTCTGCGTGCTGTCCGGGCTGGCCCACCTGGACCGGCCCTTCGACTACCTGGTGACCGAGGAGATGGTCGGCCAGGCCCGCCCCGGGATCCGGGTCAGGGTGCGGCTGGCCGGCCGGTTGCTGGACGGCATCATCCTGGCCGTCGACCACCACCGTCAGCCCGGGGTCACTCTGCAAGCCCTCCAGCGGGTGGTCTCCTCCGAGGTGGTGGTCACCGAGGACCAGCTCGCAATGGCCCGTCGGGTCGCCGACCGGTGGGCCGGCACCCTCGAGGAGGTCATTCGCTGGGCGCTGCCCGCCCGCCATGCCGCCACCGAGAGGGCAGAGCCGCGCCCCTGGCCGGTGCCCCGTCCGGCGCACATCCCCGGTGCCCTGGACGCCCTGGCCGAGGGCACCGCATTCCTCCGGCTGCTGGCCCAGGGGGGCCGCCCGCGGGCCTTCTGGAGGGTCGCCCCGGTCGCCGGGCCGGCCGACCGGGACCGGCTGGGGGACTGGCGGCTGGGCATCACCCAGGCCGTCTCGGCAGCCCTGGAGTCCGGCCGCCAGGCGCTGTGCTGCGTGCCCACCGTCGCCCAGGCCGAGGAACTGGCGGCCTGCCTCACCGAGCCCTTCGGCGCCGGAACGGTCGTCATGCTCCACGCCGACCAGAGTGCCGCCGACCGCTGGCGCAACTACCTGGCGGTGGTCCGCGGTCAGGCCTCCATCGTGGTGGGCATCCGCGGGGCGGTGCTCGCACCGCTGACCCGCCTGGGGGTGATCGTGGTGTGGGACGAGGCCGCCAGTCTCCACGACGAGCCGCGCGCCCCCTACCCGAACACCCGCGATGTGGCGGCCCTGCGCGCCCAGACCGACCGGTGCGCGCTGCTGCTGGCCGGTCACTCCTGCTCACCGCAGACCGCGGGGTGGTTGTCGACCGGCTGGCTGGCGCAGATCCAGACCCCCCGGGAGCAGCTCAGGGCGCTGTGCGCCACCGTCCGGGCTCCGGGGGACTCCGATCTCGGGCTGTCGCGCGACCCACTGGCCAACCGGGTCCGGCTTCCGGACCTGGCGATGCAGACCATCTCTCACGGACTCCTCTCCGGTCCGGTGCTGGTCTCGGTGCCCAGACCCGGGGACCTGGTGCGGCCCTGCTGCGCGAGCTGCCGGGCCCCGATCTCCTGCCCCCGCTGCAACGGCCCGGTACGGGGCCGCAGGCTGGCCGGGGGAGCCACCGAACTGGAGTGCACCTGGTGCGGCCAGCTGCTGGCCGGCTGGGCCTGCTCCAGCTGCGGTGGCACCGTGGTGCGCTCCGGGGTGGTCGGTGCCAGCACCACCGCGGCCGAGTTGGGCCGGGCCTTCCCCTCGGTCCAGGTCATCGACTCCTCGGGGGATCACATCCGAAGCTCGGTCGGGGACACCCCCGCCCTGGTGGTGGCGACCCCGATGGCCGAGCCGCGGGCCGAGTCCGGGTACGCCGCCGCCCTGCTTCTGGACGCAGGCCAGGCGCTCAACCGGCCGGGTCTGGACGCCGTCTGCCAGGCCCTGGAGCACTGGTTCCGGGTGGCCTCCCTGGTCCGCTCCGGGGTGGAGGACGGTCAGCTGGTGATCGTCGGCCCGCCCCAGGACCGGGCGGTCCAGGCGGTGATCCGCAACGACCCGGTCGGCTGGGCCGGCGTCGAGATGGCCGAGCGGGCCGAGGCCGGATTCCCGCCGGCGGCCTTCGCCGCTCTGGTGGACGGCAGCACCGAGGCTGTCGAGGCGGCCGCCGAAAGGCTGCGGAACGCCGTGGCCGAGGCCGATCTGGAGATCGGGATGGCTCCCGGCCAGGTCAACCTGCTGGGTCCGGTCGAGGTCGAGGGGCAGCGTCCCGGTGCCCCCCAGCAACGACTGGTGATCCGCGCCGAGCCGGCCCTGGCGTCCCGCCTGGTCCCGATGCTGCGCCATCTCCGCTCGGCCCACAGCATGCGCGGTGAGGGCGGGCCACTCCGGGTCCGGGTCAACCCGATCGGCCAGCTGTAG

Protein sequence:

MTEALLEPTEWVAHVCVLSGLAHLDRPFDYLVTEEMVGQARPGIRVRVRLAGRLLDGIILAVDHHRQPGVTLQALQRVVSSEVVVTEDQLAMARRVADRWAGTLEEVIRWALPARHAATERAEPRPWPVPRPAHIPGALDALAEGTAFLRLLAQGGRPRAFWRVAPVAGPADRDRLGDWRLGITQAVSAALESGRQALCCVPTVAQAEELAACLTEPFGAGTVVMLHADQSAADRWRNYLAVVRGQASIVVGIRGAVLAPLTRLGVIVVWDEAASLHDEPRAPYPNTRDVAALRAQTDRCALLLAGHSCSPQTAGWLSTGWLAQIQTPREQLRALCATVRAPGDSDLGLSRDPLANRVRLPDLAMQTISHGLLSGPVLVSVPRPGDLVRPCCASCRAPISCPRCNGPVRGRRLAGGATELECTWCGQLLAGWACSSCGGTVVRSGVVGASTTAAELGRAFPSVQVIDSSGDHIRSSVGDTPALVVATPMAEPRAESGYAAALLLDAGQALNRPGLDAVCQALEHWFRVASLVRSGVEDGQLVIVGPPQDRAVQAVIRNDPVGWAGVEMAERAEAGFPPAAFAALVDGSTEAVEAAAERLRNAVAEADLEIGMAPGQVNLLGPVEVEGQRPGAPQQRLVIRAEPALASRLVPMLRHLRSAHSMRGEGGPLRVRVNPIGQL

GenBank Info

locus_tag - FAM19038-p1-1.1_002309
inference - COORDINATES: similar to AA sequence:RefSeq:WP_004811296.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - primosomal protein N'
protein_id - extdb:FAM19038-p1-1.1_002309

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002308
FAM19038-p1-1.1_002310