update range to 10000 bp
locus tag: FAM19038-p1-1.1_002350 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 ruvA
Ortholog
 N0.HOG0001194 Holliday junction branch migration protein RuvA
KEGG gene
 K03550 ruvA; holliday junction DNA helicase RuvA [EC:5.6.2.4] kornec03440
Gene Product
 Holliday junction branch migration protein RuvA
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140097 catalytic activity, acting on DNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071496 cellular response to external stimulus
Gene Ontology
 GO:0071103 DNA conformation change
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0051276 chromosome organization
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0032508 DNA duplex unwinding
Gene Ontology
 GO:0032392 DNA geometric change
Gene Ontology
 GO:0031668 cellular response to extracellular stimulus
Gene Ontology
 GO:0017111 ribonucleoside triphosphate phosphatase activity
Gene Ontology
 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Gene Ontology
 GO:0016817 hydrolase activity, acting on acid anhydrides
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016462 pyrophosphatase activity
Gene Ontology
 GO:0016043 cellular component organization
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009991 response to extracellular stimulus
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009605 response to external stimulus
Gene Ontology
 GO:0009432 SOS response
Gene Ontology
 GO:0009378 four-way junction helicase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0007154 cell communication
Gene Ontology
 GO:0006996 organelle organization
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006310 DNA recombination
Gene Ontology
 GO:0006302 double-strand break repair
Gene Ontology
 GO:0006281 DNA repair
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004386 helicase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003678 DNA helicase activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000725 recombinational repair
Gene Ontology
 GO:0000724 double-strand break repair via homologous recombination
Eggnog Protein
 EP:ruvA
Eggnog Ortholog
 EO:COG0632
Eggnog Description
 ED:The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence
EC Number
 EC:3.6.4.12 Transferred to 5.6.2.3 and 5.6.2.4

Occurs in the following pathway maps:

Pathway Description
kornec03440 Homologous recombination

Sequences

Nucleotide sequence (GC-content: 73.3 %):

TTGATCTCGCATCTTCGCGGCACCGTCTCCACCGCCGGCCCCACCTGGGTGGTGCTGGACATCTCGGGGGTGGGCCTGCGGGTGAGCTGCCCGCCGGCCACCGCGGCCGCCGCCCGGACCGGCTCCCAGCTGGCCCTGGAGACCAGCCTGGTGGTCCGGGAGGACTCGATGACCCTGCACGGGTTCGTCTCCGCCGCGGACCGGGACGCCTTCGAACTGGTCCAGACCGCCTCGGGGGTCGGACCGAAACTCGCGATGGCGATGCTGTCGGTCCTGGACGCCGACCAGCTGGCAGCCGCCCTGGCGGGAGAGGACGCCGCCGCACTGTGCCGGGTGCCCGGTATCGGACGCAAGGGCGCCGCAAAGCTCATCCTGGAGCTCAAGGACCGCGCCCCGATGATCTCCTCGGGGGCCGCTGCCGCCGGAGGAGCCCCGGCCGCGGTGCCGGGCGCCGAACCCTGGCGGGAACAGGTGGTCGACGGACTCACCGGTCTGGGCTGGTCGACCCGCGACGCCGAACGGGCCGCCGAGTCGGTGGCCGGGATGCGCACCGAGGATCCCGACGTCTCGATCGGGGTCCTCATGAGGGCGGCCCTCAGAAGCCTCGCCAGCTGA

Protein sequence:

MISHLRGTVSTAGPTWVVLDISGVGLRVSCPPATAAAARTGSQLALETSLVVREDSMTLHGFVSAADRDAFELVQTASGVGPKLAMAMLSVLDADQLAAALAGEDAAALCRVPGIGRKGAAKLILELKDRAPMISSGAAAAGGAPAAVPGAEPWREQVVDGLTGLGWSTRDAERAAESVAGMRTEDPDVSIGVLMRAALRSLAS

GenBank Info

gene - ruvA
locus_tag - FAM19038-p1-1.1_002350
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002526836.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - Holliday junction branch migration protein RuvA
protein_id - extdb:FAM19038-p1-1.1_002350

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002349
FAM19038-p1-1.1_002351