update range to 10000 bp
locus tag: FAM19038-p1-1.1_002367 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 trpC
KEGG reaction
 R03508 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase(cyclizing); 1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate <=> Indoleglycerol phosphate + CO2 + H2O kornec00400kornec01100kornec01110kornec01230
Ortholog
 N0.HOG0001806 indole-3-glycerol phosphate synthase TrpC
KEGG gene
 K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] kornec00400kornec01100kornec01110kornec01230
Gene Product
 indole-3-glycerol phosphate synthase TrpC
Gene Ontology
 GO:1901607 alpha-amino acid biosynthetic process
Gene Ontology
 GO:1901605 alpha-amino acid metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901362 organic cyclic compound biosynthetic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:1901135 carbohydrate derivative metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046872 metal ion binding
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0046394 carboxylic acid biosynthetic process
Gene Ontology
 GO:0046391 5-phosphoribose 1-diphosphate metabolic process
Gene Ontology
 GO:0046219 indolalkylamine biosynthetic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0044106 cellular amine metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0043169 cation binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0042435 indole-containing compound biosynthetic process
Gene Ontology
 GO:0042430 indole-containing compound metabolic process
Gene Ontology
 GO:0042401 cellular biogenic amine biosynthetic process
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0030312 external encapsulating structure
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0019693 ribose phosphate metabolic process
Gene Ontology
 GO:0019637 organophosphate metabolic process
Gene Ontology
 GO:0019438 aromatic compound biosynthetic process
Gene Ontology
 GO:0018130 heterocycle biosynthetic process
Gene Ontology
 GO:0016831 carboxy-lyase activity
Gene Ontology
 GO:0016830 carbon-carbon lyase activity
Gene Ontology
 GO:0016829 lyase activity
Gene Ontology
 GO:0016053 organic acid biosynthetic process
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009309 amine biosynthetic process
Gene Ontology
 GO:0009308 amine metabolic process
Gene Ontology
 GO:0009073 aromatic amino acid family biosynthetic process
Gene Ontology
 GO:0009072 aromatic amino acid family metabolic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008652 cellular amino acid biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006586 indolalkylamine metabolic process
Gene Ontology
 GO:0006576 cellular biogenic amine metabolic process
Gene Ontology
 GO:0006568 tryptophan metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005618 cell wall
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0004425 indole-3-glycerol-phosphate synthase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000287 magnesium ion binding
Gene Ontology
 GO:0000162 tryptophan biosynthetic process
Eggnog Protein
 EP:trpC
Eggnog Ortholog
 EO:COG0134
Eggnog Description
 ED:Indole-3-glycerol phosphate synthase
EC Number
 EC:4.1.1.48 indole-3-glycerol-phosphate synthase; indoleglycerol phosphate synthetase; indoleglycerol phosphate synthase; indole-3-glycerophosphate synthase; 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase (cyclizing) kornec00400kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00400 Phenylalanine, tyrosine and tryptophan biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 73.1 %):

ATGCCGACCGAACCGGGGGCCGGTCCCGAGACCGCCACGACCAGGGTCGCCACCGGCCCGCGACAGACCGGAACGGTTCTGGACGGCATCATCGCGGGGGTGGTGACCGATCTGCGCGAGCGTCAGCTGATGGTCAGCGAGGCCAGTCTGCGGGGGGCCATCGAGCTCGTCGCCCCGGCCCTGGACCCGGTTCCCGCGCTGCGGCGTCCCGGGCTCTCGGTGATCTCCGAGGTCAAGCGGTCCAGCCCCTCCAAGGGCTCCCTGGCCCCGATCCCGGACCCGGCCGCCCTGGCCCTGCGCTACCAGGCCGGCGGAGCCGCCGCGATCAGCGTCCTCACCGAGCAGCGCAGGTTCAGCGGAACCCTGGCCGATCTGGACGCGGTGCGCGCCGCGGTCGCCGTCCCGGTGCTGCGCAAGGACTTCATCGTCACCGAGTACCAGGTCCTGGAGGCCCGCGCCCACGGCGCCGACCTCGTGCTGCTCATCGTGGCGGCCCTGGGGGACCAGGAGCTCACCAGCCTCCACCGGCTGGTCACCAGTCTGGGGATGACCGCCCTGGTGGAGGTGCACACTCCCGAGGAGGCCCGACGGGCCGCAGACCTGGGAGCCACTGTGGTCGGGGTCAACGCCCGCAACCTCAAGACCCTCCAGGTCGACACCTCTGTCTTCGGCCAGCTGGTGGGCCTGCTGCCCGCACAGGCGGTCAAGGTCGCCGAGTCGGGCATCCTCACCCTCGACGACGCCCTGGCCGCCCACGCGGCCGGTGCCGACGCCATCCTGGTCGGTGAGGCGCTGGTCCGCTCCGGCGACCCGGCCGCCTTCATCGACTCGATCGGACGCGCCACCGGCGCGACCCCCGGCTCATCGACAGCCGGGGCCTGA

Protein sequence:

MPTEPGAGPETATTRVATGPRQTGTVLDGIIAGVVTDLRERQLMVSEASLRGAIELVAPALDPVPALRRPGLSVISEVKRSSPSKGSLAPIPDPAALALRYQAGGAAAISVLTEQRRFSGTLADLDAVRAAVAVPVLRKDFIVTEYQVLEARAHGADLVLLIVAALGDQELTSLHRLVTSLGMTALVEVHTPEEARRAADLGATVVGVNARNLKTLQVDTSVFGQLVGLLPAQAVKVAESGILTLDDALAAHAAGADAILVGEALVRSGDPAAFIDSIGRATGATPGSSTAGA

GenBank Info

gene - trpC
locus_tag - FAM19038-p1-1.1_002367
EC_number - 4.1.1.48
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070533.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - indole-3-glycerol phosphate synthase TrpC
protein_id - extdb:FAM19038-p1-1.1_002367

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002366
FAM19038-p1-1.1_002368