locus tag:
FAM19038-p1-1.1_002431
genome:
FAM19038-p1-1.1
species:
Acidipropionibacterium jensenii
taxid:
1749
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
sigma-70 family RNA polymerase sigma factor |
|
|
|
Ortholog
|
N0.HOG0002318 |
sigma-70 family RNA polymerase sigma factor |
|
|
KEGG gene
|
K03086 |
rpoD; RNA polymerase primary sigma factor |
kornec02040 |
|
Eggnog Protein
|
EP:hrdD |
|
|
|
Eggnog Ortholog
|
EO:COG0568 |
|
|
|
Eggnog Description
|
ED:Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec02040
|
Flagellar assembly |
Sequences
Nucleotide sequence (GC-content: 67.8 %):
ATGGACACCAAGTCTCGAGTTCGTACCACCGATGGCATCGATGGCAAGGACGCAGTTGGTCTCTACTTGGAGGGGATCGCTCGGACGCCTTTGCTCAACGCGGCCGAGGAGGTCGCACTGGCACGTCGTATCGAGGTGGGCGTCTTCGCCCGTGCAATCCTCGCCGGCGATGCCAAGAACCGTCTCAAAGCCAGCCAGGAGGAACTGGAGGACATCGCCGCAGACGGGGACCGGGCGATGGCCCACTTCGTTCGCGCCAATCTTCGTCTGGTGGTCTCGGTGGCCCGCAAGTACGGCCGCTCCCAGATGCCCCTGCTGGATCTGGTCCAGGAGGGCAACACCGGCCTGATCCGGGCCGTCGAGAAGTTCGACTACGCCAAGGGCTTCAAGTTCTCCACCTATGCGACCTGGTGGGTCCGTCAGGCGATCAGCCGCGGCATCGCCCAGCAGGGACGCATCGTCCGCCTGCCGGTCCATGTCGCCGAGCAGGTCAACCAGGTCTCTGCGGCCCGCCGCAACCTCGAGCGCCAGCTGGGTCGGGAGCCCGAGATCTTCGAGATCGCCGGCGAGCTGGGCCTCACCGAGGAGCGGGTCGTCGAGCTCATCCGGTTCGGCCGCGACCACGTCAGTCTCGACGCCCCTGTCGAGGACGACGGCGACACCAGCCTCGGCGATCTCATCGCCCGCGAGACCGCGCCGGGACCCGACGACATCGTTCTGGACGCCGAGGACCGCAGCCGTCTGGAGGGGCTCCTCGAGGATCTCGACGAGCGCTCCGCCGACGTGGTGCGCCGCCGGTACGGGCTGGTTGACGGACGTCAGGCCAAGCTCGCCGACATCGGCAAGGTCTGGGGGATCACCGCCGAGCGGGTCCGCCAGATCGAGCGGGCCGCGCTCACGACGATGCGCGAGCGCAACGAGGCGGTGATGGCCGCCTGA
Protein sequence:
MDTKSRVRTTDGIDGKDAVGLYLEGIARTPLLNAAEEVALARRIEVGVFARAILAGDAKNRLKASQEELEDIAADGDRAMAHFVRANLRLVVSVARKYGRSQMPLLDLVQEGNTGLIRAVEKFDYAKGFKFSTYATWWVRQAISRGIAQQGRIVRLPVHVAEQVNQVSAARRNLERQLGREPEIFEIAGELGLTEERVVELIRFGRDHVSLDAPVEDDGDTSLGDLIARETAPGPDDIVLDAEDRSRLEGLLEDLDERSADVVRRRYGLVDGRQAKLADIGKVWGITAERVRQIERAALTTMRERNEAVMAA
GenBank Info
locus_tag - FAM19038-p1-1.1_002431
inference - COORDINATES: similar to AA sequence:RefSeq:WP_004811533.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - sigma-70 family RNA polymerase sigma factor
protein_id - extdb:FAM19038-p1-1.1_002431
Gene Locus
Located on scaffold FAM19038-p1-1_scf1
FAM19038-p1-1.1_002430
