update range to 10000 bp
locus tag: FAM19038-p1-1.1_002457 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 rimO
KEGG reaction
 R10652 [ribosomal protein S12]-L-aspartate:sulfur-donor,S-adenosyl-L-methionine C3-methylthiotransferase; [Ribosomal protein S12]-L-aspartate + Sulfur donor + 2 S-Adenosyl-L-methionine <=> [Ribosomal protein S12]-3-methylthioaspartate + S-Adenosyl-L-homocysteine + L-Methionine + 5'-Deoxyadenosine
Ortholog
 N0.HOG0002569 30S ribosomal protein S12 methylthiotransferase RimO
KEGG gene
 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Eggnog Protein
 EP:rimO
Eggnog Ortholog
 EO:COG0621
Eggnog Description
 ED:Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12
EC Number
 EC:2.8.4.4 [ribosomal protein S12] (aspartate89-C3)-methylthiotransferase; RimO; [ribosomal protein S12]-Asp89:sulfur-(sulfur carrier),S-adenosyl-L-methionine C3-methylthiotransferase; [ribosomal protein S12]-L-aspartate89:sulfur-(sulfur carrier),S-adenosyl-L-methionine C3-methylthiotransferase
Gene Product
 30S ribosomal protein S12 methylthiotransferase RimO

Sequences

Nucleotide sequence (GC-content: 69.5 %):

ATGACCGTCCATCTCGTCTCGATGGGGTGTGCCCGCAACGAGGTCGACTCCGAGGAGCTGGCGGCCAGGCTGGAGGCCGGCGGATTCCAGCTGGTCGATGACGCCGAGCAGGCCGAGACGGTGGTGGTCAACACCTGCGGATTCATCGAACAGGCCAAGAAGGACTCCGTCGACACCCTGCTGGCCGCCGCGGACCTCAAGTCCGACGGCACCACGCGGTCGGTCGTCGCGGTGGGCTGCATGGCCGAGAGGTACGGCAAGGAGCTCGCCGAGGCGCTGCCGGAGGCCGACGCGGTGCTGGGATTCGACGACTACCAGGACATCTCGCAGCGCTTGAGGATCATTCTGGCCGGCGGCTCCCTGGAGGCCCACGTCCCCCACGACCGCCGCACCCTGCTGCCGCTGTCGCCGGTGGACCGGCCGGAGGCCGCCGCATCGGTCTCGGTGCCCGGCATCCACACCGCACCGGATCTGCCCACGGAGGTCACCCCGGCCAGTGGGCCGCGCGCCGCCACCCGGCGCCGACTGTCCTCCAGCCCCTGTGCGCCGCTGAAGATCGCCTCGGGCTGCGACCGGCGCTGCGCCTTCTGCGCCATCCCGAGCTTCCGCGGCTCCTATCTGTCACGGCCGGTCGAGGAGATCGTGGCGGAGGGCCGCTGGCTGGTCGACCACGGTGTCAAGGAGCTCTTCCTGGTCTCGGAGAACTCCTCCTCCTACGGCAAGGACCTCGGAGACCTGGCACACATGGAGAAGCTGCTGGCCGGGCTGGACCGGATCGACGGTCTGGACTGGATCCGGATCTCCTACCTCCAGCCCGCTGAGCTGCGGCCCTCCCTGATCGACGCGATGCTCACCACCGACAAGGTCGTGCCCTACTTCGACCTGTCCTTCCAGCACGCCTCCGGACCGCTGCTGCGGAGAATGCGACGGTTCGGCGACGCCGACTCCTTCCTCGGTCTCATCGAGGGGATCCGGGAGCGCTGCCCGGGGGCCGGGTTCCGCTCCAACTTCATCACCGGCTTCCCCGGCGAGACCGACCGGGACGTCGAGACTCTCGCCGACTTCCTTCAGCGGGCGCGTCTGGACGTCGCCGGGATCTTCGCCTACTCCGACGAGGAGGGCACCGAGGGGGCTGAGCTGAGCGATCATCTGGACGACGATGTGATCGCCGAACGGCGCGAGATGCTCGCCGACCTGATCGACGAGCTGGTCAGCCAGCGGGCCGAGGACAGGATCGGTGAGCACGCCCCGGTGCTGGTGGAGGAGGTGACCCCGGAGGCGGTCGTCGGGAGGGCTCCCCACCAGGGGCCCGAGGTGGACGGAACGGTACTGCTGCCGGCCGACTGCGGGGTCGGCGTCGGCGAGATGGTGGAGGTCGGCTTCATCGGTTCGGAGGGTGCCGACCTGATCGGGGAGTTGAGGTGA

Protein sequence:

MTVHLVSMGCARNEVDSEELAARLEAGGFQLVDDAEQAETVVVNTCGFIEQAKKDSVDTLLAAADLKSDGTTRSVVAVGCMAERYGKELAEALPEADAVLGFDDYQDISQRLRIILAGGSLEAHVPHDRRTLLPLSPVDRPEAAASVSVPGIHTAPDLPTEVTPASGPRAATRRRLSSSPCAPLKIASGCDRRCAFCAIPSFRGSYLSRPVEEIVAEGRWLVDHGVKELFLVSENSSSYGKDLGDLAHMEKLLAGLDRIDGLDWIRISYLQPAELRPSLIDAMLTTDKVVPYFDLSFQHASGPLLRRMRRFGDADSFLGLIEGIRERCPGAGFRSNFITGFPGETDRDVETLADFLQRARLDVAGIFAYSDEEGTEGAELSDHLDDDVIAERREMLADLIDELVSQRAEDRIGEHAPVLVEEVTPEAVVGRAPHQGPEVDGTVLLPADCGVGVGEMVEVGFIGSEGADLIGELR

GenBank Info

gene - rimO
locus_tag - FAM19038-p1-1.1_002457
EC_number - 2.8.4.4
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002547278.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 30S ribosomal protein S12 methylthiotransferase RimO
protein_id - extdb:FAM19038-p1-1.1_002457

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

FAM19038-p1-1.1_002456
FAM19038-p1-1.1_002458