update range to 10000 bp
locus tag: FAM19038-p1-1.1_002460 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
KEGG reaction
 R00965 orotidine-5'-phosphate carboxy-lyase (UMP-forming); Orotidine 5'-phosphate <=> UMP + CO2 kornec00240kornec01100kornec01240
Gene Code
 pyrF
Gene Product
 orotidine-5'-phosphate decarboxylase
Ortholog
 N0.HOG0003351 orotidine-5'-phosphate decarboxylase
KEGG gene
 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] kornec00240kornec01100kornec01240
Eggnog Protein
 EP:pyrF
Eggnog Ortholog
 EO:COG0284
Eggnog Description
 ED:Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
EC Number
 EC:4.1.1.23 orotidine-5'-phosphate decarboxylase; orotidine-5'-monophosphate decarboxylase; orotodylate decarboxylase; orotidine phosphate decarboxylase; OMP decarboxylase; orotate monophosphate decarboxylase; orotidine monophosphate decarboxylase; orotidine phosphate decarboxylase; OMP-DC; orotate decarboxylase; orotidine 5'-phosphate decarboxylase; orotidylic decarboxylase; orotidylic acid decarboxylase; orotodylate decarboxylase; ODCase; orotic decarboxylase; orotidine-5'-phosphate carboxy-lyase kornec00240kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00240 Pyrimidine metabolism
kornec01100 Metabolic pathways
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 71.4 %):

ATGGACACCTCCCGCCCGATCATCGCCCTCGACCTGCCCAGCGCCGACCAGGCGCTGGCGCTGGTCTCACGGTTCGGCGACGAGAAACTCTTCCTCAAGGTGGGGATGGAGCTGTTCTACGCGTCGGGCCCCGGCATCGTCGGACAGCTCAAGGACGCCGGCCACGACGTCTTCTGCGATCTCAAACTCCACGACATCCCCAACACCGTCAAGCGGGCCGCGGCCAGCCTCGCCGGGCTGGGGGCCGATCTGCTCACCGTCCACGCCGCCGGCGGGAGGGCGATGATGGAGGCCGCCGTGGAGGGGCTGTCGGCCGCCTCCAACGACCCCTCGGTGGTCGCCATCACCCAGCTCACCTCGACCAGCGAGGAGGCGATGCACACCGAGCAGCTCATCGAGGTGCCGCTGGCCGAGTCGGTGGTCCACTACGCCCAGCTGGCCCAGTCCGCCGGACTGGCCGGAGTGGTGTGCTCGGCCTGGGAGGCCGCCGGCATCGGCGAGGCGACCGGCGAGTCCTTCCTGCGGGTCACCCCGGGAATCCGGCCGACCGGCGCCGCGGTCGGCGACCAGGCCCGGGTCGCCACCCCCGAGAAGGCCCACTCGATGGGGTCCAGCGCCATCGTGGTGGGACGGCCCATCACCCGTGCCGAGGACCCGGTGGCCGCCTACCACGCCATCCGGAAGGCCTGGAACAGCGGTCAGCAGAGCTGA

Protein sequence:

MDTSRPIIALDLPSADQALALVSRFGDEKLFLKVGMELFYASGPGIVGQLKDAGHDVFCDLKLHDIPNTVKRAAASLAGLGADLLTVHAAGGRAMMEAAVEGLSAASNDPSVVAITQLTSTSEEAMHTEQLIEVPLAESVVHYAQLAQSAGLAGVVCSAWEAAGIGEATGESFLRVTPGIRPTGAAVGDQARVATPEKAHSMGSSAIVVGRPITRAEDPVAAYHAIRKAWNSGQQS

GenBank Info

gene - pyrF
locus_tag - FAM19038-p1-1.1_002460
EC_number - 4.1.1.23
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002548698.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - orotidine-5'-phosphate decarboxylase
protein_id - extdb:FAM19038-p1-1.1_002460

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

FAM19038-p1-1.1_002459
FAM19038-p1-1.1_002461