locus tag:
FAM19038-p1-1.1_002533
genome:
FAM19038-p1-1.1
species:
Acidipropionibacterium jensenii
taxid:
1749
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
Y4yA family PLP-dependent enzyme |
|
|
|
KEGG reaction
|
R00451 |
meso-2,6-diaminoheptanedioate carboxy-lyase (L-lysine-forming); meso-2,6-Diaminoheptanedioate <=> L-Lysine + CO2 |
kornec00300kornec01100kornec01110kornec01120kornec01230 |
|
Ortholog
|
N0.HOG0006251 |
Y4yA family PLP-dependent enzyme |
|
|
KEGG gene
|
K01586 |
lysA; diaminopimelate decarboxylase [EC:4.1.1.20] |
kornec00300kornec01100kornec01110kornec01120kornec01230 |
|
Eggnog Ortholog
|
EO:COG0019 |
|
|
|
Eggnog Description
|
ED:Pyridoxal-dependent decarboxylase |
|
|
|
EC Number
|
EC:4.1.1.20 |
diaminopimelate decarboxylase; diaminopimelic acid decarboxylase; meso-diaminopimelate decarboxylase; DAP-decarboxylase; meso-2,6-diaminoheptanedioate carboxy-lyase |
kornec00300kornec01100kornec01110kornec01120 |
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec00300
|
Lysine biosynthesis |
|
kornec01100
|
Metabolic pathways |
|
kornec01110
|
Biosynthesis of secondary metabolites |
|
kornec01120
|
Microbial metabolism in diverse environments |
|
kornec01230
|
Biosynthesis of amino acids |
Sequences
Nucleotide sequence (GC-content: 73.0 %):
GTGACCGAGGAACCCACCCTGCGCGAGGCATGCCAGGGAACCCCGCCGCTGTCGGCTCGTCTGGAGCCGTGGATGCAGGAGCTGCTGGCGGACCCTGCGACCTGCAGCTCGCTGCTGGAGCGCTACGGAAGCCCGCTGAACGTGCACGACTTTTCCGCGCTGCCGCGCAACGCCGCAGAGCTCACGGAGGTGGCCGAGGGCTCCGGGGTGGACCTGCGGATCTTCGTGGCACGCAAGGCCAACAAGACCCTCGGCATGGTGCGTGCCGCGCATCGCGCCGGGCTGGGGGTCGACGTGGGCAGCGAGCGCGAGCTGGGCCAGGTGCTCGAGGCCGGTGTGCCGCCGCATGACGTGGTGGTCACCGCGGCCATCAAGCCCGATCCGGTGCTGCGCCTGGCCCTGGAGTCCCGCTCACTGCTGGTGATGGACAACCTCGACGAGGTGGCCGCCTCCCGGAGGGTCGCCGAGCAGGTCACCGGCGCCCGGAGCGCGGAACCAGGTCGCCCCGCGGACGGGGCCTCTGGTGCCCCCGAGCCGTTCCCCGTGGCGCTGCGCCTCGCGCCCAAGCCCAGCGACCTGATCCCGCCCACCCGCTTCGGGGAGTCGGCCCGCGCCTGGCTCGAGCTGATCGACTCCGGCGGCCTGGGCGACCTGCTGCGGGTGGACGGTGTGCACTTCCACCTGCACGGCTATGACCCGACCGCGCGCGCCACCGCCCTCGGGGAGGCGCTGGAGCTGATCGACGCGCTGCGCGAGCGCGGCCTGGCCCAGGATGGCGCGTTCGTGGACATCGGCGGCGGCATCCCGATGAGCTACCTGGACGATGCCGAGCAGTGGGACGCCTTCTGGCAGGCCCACGAGCGGCAGGCCCCGGAGTCGGGCCTCGGCGGGGGTGCTCGCGCGGCCGACGACGACCGGCCCGCGGCTGCCCCCGACGCCGGCGAGGACGCCCCCACCGCCCCGCTGACCTGGCGCCGGGAACCGCTGCGGCAGGTGTACCCCTACCACCAGCAGGTGATCCGCGGGCCCTGGCTGGAGCGGTTCCTGGGCCACGAGATCCGCCCGGGTGCCACTGCCGGGCAGGCCCTGCGAGAGCGCGGGGTGCAGCTGCGCTGCGAGCCGGGCCGCTCCATGATGGACGGTTGCGGCATGACGCTGGCGAGGGTCATCCAGCGCACCAGTGCCAGCGACGGCGTGCCCCTGGTGGGGCTGGAGATGAACCGCACCCAGTGCCGCTCCACCTCCGACGACTTCCTGGTGGACCCGATCCTGGTGCGCACCGGCACACGCGACGATGCCACGGATCCGTCGGTCGCCGGTGCCGGGCAGAGCAGGGCGAGCGAACGGTTCGAGGGGTTCCTGGTGGGCGCCTACTGCATCGAGGCCGAGCTGATCCTGCGTCGGCGCCTCGCGTTCCCGCAGGGTGTGGCCGTGGGCGATGTGATCGCCCTGCCCAACACCGCCGGGTACCTGATGCACATCCTGGAGAGCGCTTCCCACCAGATCCCCCTGGCCTCCAACGTGGAGCGCGTCGGCGGTGGGGAGGCAGGCGGATCCGGAGGTGACCACCCCAGCGCAGAGGTGGCGGACCGCAGCAGGATGGGCGGCACGGACCACAGCAGCACCGCCGTCGAAGGCAGCGATCCCCGTCCTGATGTGCCCGGGTTCAAGCGCGACGGCATCGACCGGGTGCTGCCCATCCGGGCCTGA
Protein sequence:
MTEEPTLREACQGTPPLSARLEPWMQELLADPATCSSLLERYGSPLNVHDFSALPRNAAELTEVAEGSGVDLRIFVARKANKTLGMVRAAHRAGLGVDVGSERELGQVLEAGVPPHDVVVTAAIKPDPVLRLALESRSLLVMDNLDEVAASRRVAEQVTGARSAEPGRPADGASGAPEPFPVALRLAPKPSDLIPPTRFGESARAWLELIDSGGLGDLLRVDGVHFHLHGYDPTARATALGEALELIDALRERGLAQDGAFVDIGGGIPMSYLDDAEQWDAFWQAHERQAPESGLGGGARAADDDRPAAAPDAGEDAPTAPLTWRREPLRQVYPYHQQVIRGPWLERFLGHEIRPGATAGQALRERGVQLRCEPGRSMMDGCGMTLARVIQRTSASDGVPLVGLEMNRTQCRSTSDDFLVDPILVRTGTRDDATDPSVAGAGQSRASERFEGFLVGAYCIEAELILRRRLAFPQGVAVGDVIALPNTAGYLMHILESASHQIPLASNVERVGGGEAGGSGGDHPSAEVADRSRMGGTDHSSTAVEGSDPRPDVPGFKRDGIDRVLPIRA
GenBank Info
locus_tag - FAM19038-p1-1.1_002533
inference - COORDINATES: similar to AA sequence:RefSeq:WP_017824726.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - Y4yA family PLP-dependent enzyme
protein_id - extdb:FAM19038-p1-1.1_002533
Gene Locus
Located on scaffold FAM19038-p1-1_scf1
FAM19038-p1-1.1_002532
