update range to 10000 bp
locus tag: FAM19038-p1-1.1_002662 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 rplU
Ortholog
 N0.HOG0001229 50S ribosomal protein L21
KEGG gene
 K02888 RP-L21, MRPL21, rplU; large subunit ribosomal protein L21 kornec03010
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005198 structural molecule activity
Gene Ontology
 GO:0003735 structural constituent of ribosome
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:rplU
Eggnog Ortholog
 EO:COG0261
Eggnog Description
 ED:This protein binds to 23S rRNA in the presence of protein L20
Gene Product
 50S ribosomal protein L21

Occurs in the following pathway maps:

Pathway Description
kornec03010 Ribosome

Sequences

Nucleotide sequence (GC-content: 60.8 %):

GTGTACGCGATCGTGCGTAGTGGCGGCCGCCAGCACAAGGTGGCAGTGGGTGACGTCGTCGAGATCGACAAGGTCACCGACGAGGTGGGCAGCAGCATTGAGCTGACTCCCCTTCTGCTGGTGGACGGCGAGTCTGTCACCTCACAGAAGGATGCCCTCGCCAATGTCTCGGTGACCGCCGAGGTGCTGGGTGAGGCCAAGGGTCCGAAGATCAGGATCCTCAAGTTCAAGAACAAGACCGGTTACAAGAAGCGCCAGGGGCACCGTCAGAAGTACACCCAGGTCAAGGTCACCGGGATCAAGGGCTGA

Protein sequence:

MYAIVRSGGRQHKVAVGDVVEIDKVTDEVGSSIELTPLLLVDGESVTSQKDALANVSVTAEVLGEAKGPKIRILKFKNKTGYKKRQGHRQKYTQVKVTGIKG

GenBank Info

gene - rplU
locus_tag - FAM19038-p1-1.1_002662
inference - COORDINATES: similar to AA sequence:RefSeq:WP_009639958.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 50S ribosomal protein L21
protein_id - extdb:FAM19038-p1-1.1_002662

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002661
FAM19038-p1-1.1_002663