locus tag:
FAM19038-p1-1.1_002663
genome:
FAM19038-p1-1.1
species:
Acidipropionibacterium jensenii
taxid:
1749
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
Rne/Rng family ribonuclease |
|
|
|
Ortholog
|
N0.HOG0002472 |
Rne/Rng family ribonuclease |
|
|
KEGG gene
|
K08301 |
rng, cafA; ribonuclease G [EC:3.1.26.-] |
|
|
KEGG gene
|
K08300 |
rne; ribonuclease E [EC:3.1.26.12] |
kornec03018 |
|
Eggnog Protein
|
EP:rne |
|
|
|
Eggnog Ortholog
|
EO:COG1530 |
|
|
|
Eggnog Description
|
ED:Ribonuclease E/G family |
|
|
|
EC Number
|
EC:3.1.26.12 |
ribonuclease E; endoribonuclease E; RNase E; Rne protein |
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec03018
|
RNA degradation |
Sequences
Nucleotide sequence (GC-content: 71.0 %):
ATGGTCCAGGACAGCAACGACAGCACCACCTCGGAATCGACACCTGAGAAGTCGAGATCGCGACACCACAGGGCGGCGTCGCGACCGGCAGGGGCACCCACCACCCCCGCGATCACCGCCAGCCCGGCAGCCCCGGCCCTGACGATCGGCGCCGCGGGCTCCGGCGGCAGCGTCATCACCTCCGCGACAGACACCTCCGACCTTCCCCGCCCCCCGGTCGGACGTCGTCGTCGCGCCACCCGCTCGAGCAGTTCCCCGGCCGCCGAGAAGGCCGCCCCCAGGACGGCCGAGAAGCCGGTCGCCACGGCCGCTGAGAAGGCCGTTGAGAAGACCGACGAGAAGCCGGCCCGCACCACGCGCCGCCGCGCCACCCGCTCTCAGGCCCCCGCGAGCGCTCCCGCTGCTGCCGGCGCCGAGGACGGTGCCGCCTCCGAGGCCCCCACCAGGAGGTCCAGGCGGACCGCCGCGACGCGCAAGGACGCCGCGGACACCGGCGCCGATGAGGGTGCCATCGACGCGGCCCTGTCGAAGGCCGCCGAGCACGCCGCCGACCGGACCGACGCTCTGGACGCCGCGGTCGCCAACCCCTTCGCCTCCGCCGACCCGAACCGGTCGACCGCAGACATCCTCGACTCGCTGGCCGCCGAGATCGGTGGCGAGGAGGCCGCCCCGAAGCGGACCCGTCGTCGTCGCACCCGTTCGGGCGAGAAGACCCCTGAGCAGAAGGACGGTGCACAGAAGGACGGTGCACAGAGGGACAACGAGCCGAACGACAACGAGCAGAAGCCCGCGGAGCAGCACGAGGAGGCCGCCGAGCAGGACGGCCCCACCGGCCAGGCTCCCGCCGACCGGGCCGGGGAGAGCTCCGCGCCCGATCAGCACGAGGACCAGCACGACGAGGACCACGAGGACCAGCACGGCGAGTCCGAGGACGCCGATGAGTCCCGCGGCACCCGTCGCCGTCGTCGTCGCGGAGGACGCCGCCGTCGTCGCGGTGAGGCCGCCGAGGACCACGAGGACCAGCACGGCGAGGACTCCGAGGAGTCCGACGGCGAGGATCAGCACGACAAGCACGAGAACCACCGGCACGAGGACCGCGAGAAGCAGGACCACGACCGCAACGGCGAGGAGGAGGCCGGCTCGAGCCGTCGTCGCCGCCGTCGTCGCCGTCGCCGCGGGGAGGACACCACCGGTGCCGACGACGACCCGAGCGACGTCGTCGTCAAGGTCCGCGAGCCGCGCCCGCGCCACTCGGTGACCGACGAGGTCACCGGGATCGAGGGGTCGACCCGCCTGGAGGCCAAGAAGCAGCGCCGCCGCGAGGGCCGGGCCGCCGGCCGGCGCCGCAGCGCGGTGCTCACCGAGGCCGAGTTCCTGGCCCGCCGCGAGCAGGTCGAGCGCCGGATGGTGGTGCGCCAGTCCGAGGACTACTCCCAGCTGGCGGTCCTGGAGGACGGGGCACTGGTCGAGCACTACGTCGACCGGTCCTCGGCGGCCTCCTCGATCGGCAACATCTACCTCGGCAAGGTGCAGAACGTGCTGCCCTCGATGGAGGCGGCCTTCGTCGACATCGGTCGCGGCCGCAACGCCGTCCTGTACGCCGGCGAGGTCGACTGGTCGAGGTACGGCAAGGAGGGCGAGCCCAGGCGCATTGAGCACGCCCTGAAGTCGGGCGACCAGGTGCTGGTCCAGGTGTCCAAGGACCCGGTCGGTCAGAAGGGCGCCAGGCTCACCAGCCACATCTCGATCCCCGGTCGCTTCATCGTCTACTCCCCGGGCGGACAGCTGTCCGGGATCTCCCGCAAGCTCGCCGACACCGAGCGCAAGCGGCTGAAGAAGATCATCGACAGCAACATCCCCTCCGACGCCTCCGTGATCGTGCGGACCGCCGCCGAGGGCGCCTCCGAGGAGGACCTGGAGCGCGACATCAATCGCCTCAAGGCCCAGTGGGAGGTCATCGAGCGCAAGGCCAAGAGCAGCCACGCCCCGGCGATGCTGTACACCGAGCCCGACCTGACCCTGCGGATCATCCGCGACCTGTTCACCGCCGACTTCACCGAACTGGTGGTGGCCGGTGCCGGTGGGCCCGATGACGCCTACGACACCATCAAGGGCTACATCGACCACGTCGCCCCCGATCTGGGCGGCCGGCTGACCCGCTGGGACACCGAGACCCAGGGCGATCCCTTCGCCCAGTACCGGATCGACGAGCAGATCGCCAAGGCCCTGGAGCGCAAGGTCTTCCTGCCCTCCGGCGGCTCCCTGGTGATCGACCGCACCGAGGCCATGACGGTCATCGACGTCAACACCGGCAAGTTCACCGGATCGGCCGGCAACCTGGAGGCCACCGTCACCGCCAACAACCTGGAGGCGGCCGAGGAGATCGTCCGCCAGCTCAGGCTGCGCGACATCGGCGGCATCATCGTCACCGACTTCATCGACATGGTGCTTCCGGTCAACCGGGAGCTGCTGGTGAGGCGGCTGGTGGAGTGCCTGGGACGGGACAGGACCCGCCACCAGGTCTCCGAGGTGACCTCCCTGGGCCTGGTGCAGATGACCCGTAAGAAGATCGGCACCGGACTGGCCGAGGCCTTCACCGAGGAGTGCAAGGAGTGCGGCGGCCGGGGATATCATCGGTTCACCGAACCTGTGGACTCGCAGGCTCCGGCCGACGGCGGGGAGAGGTCGGCCCACAAGGGTCGCTCGAACCACTCCCGGTCGGGATCGAAGCACTCGGGCCACGGCTCCAGAAAGTCGGACTGA
Protein sequence:
MVQDSNDSTTSESTPEKSRSRHHRAASRPAGAPTTPAITASPAAPALTIGAAGSGGSVITSATDTSDLPRPPVGRRRRATRSSSSPAAEKAAPRTAEKPVATAAEKAVEKTDEKPARTTRRRATRSQAPASAPAAAGAEDGAASEAPTRRSRRTAATRKDAADTGADEGAIDAALSKAAEHAADRTDALDAAVANPFASADPNRSTADILDSLAAEIGGEEAAPKRTRRRRTRSGEKTPEQKDGAQKDGAQRDNEPNDNEQKPAEQHEEAAEQDGPTGQAPADRAGESSAPDQHEDQHDEDHEDQHGESEDADESRGTRRRRRRGGRRRRRGEAAEDHEDQHGEDSEESDGEDQHDKHENHRHEDREKQDHDRNGEEEAGSSRRRRRRRRRRGEDTTGADDDPSDVVVKVREPRPRHSVTDEVTGIEGSTRLEAKKQRRREGRAAGRRRSAVLTEAEFLARREQVERRMVVRQSEDYSQLAVLEDGALVEHYVDRSSAASSIGNIYLGKVQNVLPSMEAAFVDIGRGRNAVLYAGEVDWSRYGKEGEPRRIEHALKSGDQVLVQVSKDPVGQKGARLTSHISIPGRFIVYSPGGQLSGISRKLADTERKRLKKIIDSNIPSDASVIVRTAAEGASEEDLERDINRLKAQWEVIERKAKSSHAPAMLYTEPDLTLRIIRDLFTADFTELVVAGAGGPDDAYDTIKGYIDHVAPDLGGRLTRWDTETQGDPFAQYRIDEQIAKALERKVFLPSGGSLVIDRTEAMTVIDVNTGKFTGSAGNLEATVTANNLEAAEEIVRQLRLRDIGGIIVTDFIDMVLPVNRELLVRRLVECLGRDRTRHQVSEVTSLGLVQMTRKKIGTGLAEAFTEECKECGGRGYHRFTEPVDSQAPADGGERSAHKGRSNHSRSGSKHSGHGSRKSD
GenBank Info
locus_tag - FAM19038-p1-1.1_002663
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070058.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - Rne/Rng family ribonuclease
protein_id - extdb:FAM19038-p1-1.1_002663
Gene Locus
Located on scaffold FAM19038-p1-1_scf1
FAM19038-p1-1.1_002662
