update range to 10000 bp
locus tag: FAM19038-p1-1.1_002665 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
KEGG reaction
 R11895 ATP:5-fluorodeoxyuridine-diphosphate phosphotransferase; ATP + 5-Fluorodeoxyuridine diphosphate <=> ADP + 5-Fluorodeoxyuridine triphosphate kornec00983
KEGG reaction
 R11894 ATP:5-fluorouridine-diphosphate phosphotransferase; ATP + 5-Fluorouridine diphosphate <=> ADP + 5-Fluorouridine triphosphate kornec00983
KEGG reaction
 R03530 ATP:dIDP phosphotransferase; ATP + dIDP <=> ADP + dITP kornec00230
KEGG reaction
 R02331 ATP:dUDP phosphotransferase; ATP + dUDP <=> ADP + dUTP kornec00240kornec01100
KEGG reaction
 R02326 ATP:dCDP phosphotransferase; ATP + dCDP <=> ADP + dCTP kornec00240kornec01100
KEGG reaction
 R02093 ATP:dTDP phosphotransferase; ATP + dTDP <=> ADP + dTTP kornec00240kornec01100
KEGG reaction
 R01857 ATP:dGDP phosphotransferase; ATP + dGDP <=> ADP + dGTP kornec00230kornec01100
KEGG reaction
 R01137 ATP:dADP phosphotransferase; ATP + dADP <=> ADP + dATP kornec00230kornec01100
KEGG reaction
 R00722 ATP:IDP phosphotransferase; ATP + IDP <=> ADP + ITP kornec00230kornec01100
KEGG reaction
 R00570 ATP:CDP phosphotransferase; ATP + CDP <=> ADP + CTP kornec00240kornec01100kornec01240
KEGG reaction
 R00330 ATP:GDP phosphotransferase; ATP + GDP <=> ADP + GTP kornec00230kornec01100
KEGG reaction
 R00156 ATP:UDP phosphotransferase; ATP + UDP <=> ADP + UTP kornec00240kornec01100kornec01240
KEGG reaction
 R00139 ATP:2'-deoxy-5-hydroxymethylcytidine-5'-diphosphate phosphotransferase; 2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate + ATP <=> 2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate + ADP kornec00240
KEGG reaction
 R00124 ATP:ADP phosphatransferase; ATP + ADP <=> ADP + ATP kornec00230kornec01100kornec01110kornec01240
Gene Product
 nucleoside-diphosphate kinase
Gene Code
 ndk
Ortholog
 N0.HOG0001589 nucleoside-diphosphate kinase
KEGG gene
 K00940 ndk, NME; nucleoside-diphosphate kinase [EC:2.7.4.6] kornec00230kornec00240kornec00983kornec01100kornec01110kornec01240kornec04016
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0090305 nucleic acid phosphodiester bond hydrolysis
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0072527 pyrimidine-containing compound metabolic process
Gene Ontology
 GO:0072521 purine-containing compound metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0055086 nucleobase-containing small molecule metabolic process
Gene Ontology
 GO:0046939 nucleotide phosphorylation
Gene Ontology
 GO:0046777 protein autophosphorylation
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044267 -
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0044217 other organism part
Gene Ontology
 GO:0044216 obsolete other organism cell
Gene Ontology
 GO:0044215 obsolete other organism
Gene Ontology
 GO:0043657 host cell
Gene Ontology
 GO:0043656 host intracellular region
Gene Ontology
 GO:0043412 macromolecule modification
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042025 host cell nucleus
Gene Ontology
 GO:0036211 protein modification process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033648 host intracellular membrane-bounded organelle
Gene Ontology
 GO:0033647 host intracellular organelle
Gene Ontology
 GO:0033646 host intracellular part
Gene Ontology
 GO:0033643 host cell part
Gene Ontology
 GO:0019637 organophosphate metabolic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0019205 nucleobase-containing compound kinase activity
Gene Ontology
 GO:0018995 host cellular component
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016776 phosphotransferase activity, phosphate group as acceptor
Gene Ontology
 GO:0016772 transferase activity, transferring phosphorus-containing groups
Gene Ontology
 GO:0016740 transferase activity
Gene Ontology
 GO:0016310 phosphorylation
Gene Ontology
 GO:0016301 kinase activity
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009132 nucleoside diphosphate metabolic process
Gene Ontology
 GO:0009117 nucleotide metabolic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006753 nucleoside phosphate metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006468 protein phosphorylation
Gene Ontology
 GO:0006464 -
Gene Ontology
 GO:0006220 pyrimidine nucleotide metabolic process
Gene Ontology
 GO:0006165 nucleoside diphosphate phosphorylation
Gene Ontology
 GO:0006163 purine nucleotide metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005576 extracellular region
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004550 nucleoside diphosphate kinase activity
Gene Ontology
 GO:0004518 nuclease activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:ndk
Eggnog Ortholog
 EO:COG0105
Eggnog Description
 ED:Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism
EC Number
 EC:2.7.4.6 nucleoside-diphosphate kinase; nucleoside 5'-diphosphate kinase; nucleoside diphosphate (UDP) kinase; nucleoside diphosphokinase; nucleotide phosphate kinase; UDP kinase; uridine diphosphate kinase kornec00230kornec00240kornec00983kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec00240 Pyrimidine metabolism
kornec00983 Drug metabolism - other enzymes
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01240 Biosynthesis of cofactors
kornec04016 MAPK signaling pathway - plant

Sequences

Nucleotide sequence (GC-content: 68.3 %):

ATGAGCGACAAGCAGAGAGTCCTCGTCCTCCTCAAGCCAGACGCAGTGAAGCGTCGTCTCATCGGAGAGATCATCGGCAGGTACGAGGCGCGCGGGCTGACGGTGCGGGCCATGGAGCTGCGCACGATCGACGCCGAGATGGCCGCCCAGCACTACGCCGAACACATCGGACGTCCCTATTACGAGCCCCTGGTGGAGTTCATCACCTCCGGCCCGCTGGTGGCGATGGTCCTGGAGGGTCGCAAGGCGATCCCGGTGGTCCGCGCCATGAACGGGAAGACCGACTGCGCCGAGGCCGTCCCCGGCACCATCCGCGGGGATCTCGGGGTGCACTACCGTCGCAACCTGGTGCACGCCTCGGACTCCCCGGAGTCGGCGGCCCGCGAGGTCGCCCTGTGGTTCCCCCAGCTCGCCGAGGAGCCGGACGAGACCGCATGA

Protein sequence:

MSDKQRVLVLLKPDAVKRRLIGEIIGRYEARGLTVRAMELRTIDAEMAAQHYAEHIGRPYYEPLVEFITSGPLVAMVLEGRKAIPVVRAMNGKTDCAEAVPGTIRGDLGVHYRRNLVHASDSPESAAREVALWFPQLAEEPDETA

GenBank Info

gene - ndk
locus_tag - FAM19038-p1-1.1_002665
EC_number - 2.7.4.6
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070054.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - nucleoside-diphosphate kinase
protein_id - extdb:FAM19038-p1-1.1_002665

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0243: GO:0005576 extracellular region
SL-0229: GO:0005622 intracellular anatomical structure
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
SL-0431: GO:0018995 host cellular component
SL-0406: GO:0033648 host intracellular membrane-bounded organelle
SL-0414: GO:0042025 host cell nucleus
SL-0427: GO:0043657 host cell
SL-0487: GO:0044216 obsolete other organism cell
FAM19038-p1-1.1_002664
FAM19038-p1-1.1_002666