Annotations

Type Name Description Pathways
Gene Code
uvrA
Ortholog
N0.HOG0001302 excinuclease ABC subunit UvrA
KEGG gene
K03701 uvrA; excinuclease ABC subunit A kornec03420
Gene Ontology
GO:0080090 regulation of primary metabolic process
Gene Ontology
GO:0071944 cell periphery
Gene Ontology
GO:0065007 biological regulation
Gene Ontology
GO:0060543 negative regulation of strand invasion
Gene Ontology
GO:0060542 regulation of strand invasion
Gene Ontology
GO:0060255 regulation of macromolecule metabolic process
Gene Ontology
GO:0051716 cellular response to stimulus
Gene Ontology
GO:0051172 negative regulation of nitrogen compound metabolic process
Gene Ontology
GO:0051171 regulation of nitrogen compound metabolic process
Gene Ontology
GO:0051053 negative regulation of DNA metabolic process
Gene Ontology
GO:0051052 regulation of DNA metabolic process
Gene Ontology
GO:0050896 response to stimulus
Gene Ontology
GO:0050794 regulation of cellular process
Gene Ontology
GO:0050789 regulation of biological process
Gene Ontology
GO:0048523 negative regulation of cellular process
Gene Ontology
GO:0048519 negative regulation of biological process
Gene Ontology
GO:0045934 negative regulation of nucleobase-containing compound metabolic process
Gene Ontology
GO:0045910 negative regulation of DNA recombination
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044444 obsolete cytoplasmic part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0033554 cellular response to stress
Gene Ontology
GO:0031324 negative regulation of cellular metabolic process
Gene Ontology
GO:0031323 regulation of cellular metabolic process
Gene Ontology
GO:0030312 external encapsulating structure
Gene Ontology
GO:0019222 regulation of metabolic process
Gene Ontology
GO:0019219 regulation of nucleobase-containing compound metabolic process
Gene Ontology
GO:0016020 membrane
Gene Ontology
GO:0010605 negative regulation of macromolecule metabolic process
Gene Ontology
GO:0009987 cellular process
Gene Ontology
GO:0009892 negative regulation of metabolic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
GO:0006950 response to stress
Gene Ontology
GO:0005886 plasma membrane
Gene Ontology
GO:0005829 cytosol
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005618 cell wall
Gene Ontology
GO:0005575 cellular_component
Gene Ontology
GO:0000018 regulation of DNA recombination
Gene Product
excinuclease ABC subunit UvrA
Eggnog Protein
EP:uvrA
Eggnog Ortholog
EO:COG0178
Eggnog Description
ED:The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB
EC Number
EC:3.1.25.- -

Occurs in the following pathway maps:

Pathway Description
kornec03420 Nucleotide excision repair

Sequences

Nucleotide sequence (GC-content: 69.2 %):

ATGAACCCCGTGAGTGATCGCATCATCGTCCGGGGAGCCCGGGAACACAATCTGCGCAACGTCAGCCTGTCACTGCCGCGCGACGCCATGATCGTGTTCACCGGCCTGTCCGGGTCCGGCAAGTCCTCGCTGGCCTTCGACACCATCTTCGCCGAGGGCCAACGCCGCTACGTGGAGTCCCTGTCGGCCTACGCCCGGCAGTTCCTCGGCCAGATGGACAAGCCCGATGTCGACTTCATCGAGGGGCTCTCCCCGGCGGTGTCCATCGACCAGAAGTCCACCTCCCGCAATCCCCGGTCCACGGTCGGCACCATCACCGAGATCCACGACTACCTGCGGCTGCTGTGGGCGCGGATCGGGGTGCCGCACTGCCCCGTGTGCGGGGAGCGGATCTCCCGGCAGACCCCCCAGCAGATCGTCGACCGGCTGATCGCACTGCCGGAGGGGACCCGCATCCAGGTGCTCGCCCCGGTCATCCAGGGCCGCAAGGGGGAGTACGTCGAGCTGTTCCGTCAGCTCGTCACCGACGGCTACACCCGGGTCCGGGTGGACGGGGAGGTGCACCGCCTCGACGACCCGCCGGCCCTGGACAAGAAGCGCAAGCACAACATCGAGGTGGTCGTCGACCGGATCGCGATCAAGGAGTCCGCCAAGCAGCGCCTCACCGAGTCCGTGGAGGCCGCCCTGGGGCTGGCCCACGGGGTGGTCGCGATCGACTTCGTCGACCGGGAGCAGGCCGCCCCGGACCGGATCCGGCGGTTCAGCGAGAACATGGCCTGCCCCAACCAGCACGACATCGACATCGACGAGCTGGAGCCCCGGCAGTTCTCCTTCAACGGCCCCTGGGGGGCCTGCCCGGAGTGCTCGGGGCTGGGCACCACCCTCGATGTCGACCCCGACCTGGTGGTCCCCGACCGGCAGGTCAGCCTGTCCGACGGTGCGATCGCCCCCTGGTCGACCCCGCAGGTCGCCAATCACTACCGGCACGTCTTCGAGGCCCTCGGCCGCGACAACGACTTCGACCCCGAGCTGGCCTGGCAGGACCTTCCCGCCCATGCCCGCGCCCTCGTCCTGCACGGCGACGGGGATCCGGTGATGATCAGCTACCGCAACCGGTTCGGCAGGCTGCGCAGCTACTCCCAGAACTACGAGGGAGTGATGCACTACGTGCGGCGCCGCTATGACGAGGCCGAGACCGACACCGCGCGCTCCCGGTGGGGCGCCTACCTGCGGGAGAGCCCCTGCCCGGCGTGCCAGGGTCGGCGGCTCAAGCCCGCCAGCCTGGCGGTGACGGTCGGGGACCGCGACATCGCCGAGGTCTCCGACCTGTCCATCGGTGACGCCTGGACCTTCCTGGAGTCCCTGGAACTGAGCACCCGCGAGTTGGCCATCTCGGAGCGGGTGGTCAAGGAGGTCCGGGCGAGGCTGCGGTTCCTCATCGACGTCGGCCTGGACTACCTCACGCTGTCCCGCTCGGCCGGCTCGCTGTCGGGCGGGGAGGCCCAGCGGATCCGGCTGGCCACCCAGATCGGTTCGGGGCTGGTCGGCGTCCTCTATGTGCTGGACGAACCCTCCATCGGGCTCCACCAGCGCGACAACCGGCGACTCATCGAGACCCTCATCCGGCTGCGCGATCTCGGCAACACCCTCATCGTCGTGGAGCACGACGAGGACACCATCCGGGTGGCCGACTGGGTGGTCGACGTCGGCCCCGGAGCCGGCGAGCACGGCGGAAGGATCGTGGTCTCCGGGCCGGTGAGCGAGTTGATGGCCAGTCGCGAGTCCATCACTGGCGCCTACCTGTCCGGACGGCGGTCCATCCCGCTGCCTGCTGACCGGCGTCCCCGCACCGGCCGCGACGTCGTGGTGCGCGGCGCCCGGCAGAACAACCTCAAGGGGATCGACGTCTCCTTCCCGCTCGGCCAGCTCGTGGTGGTCACCGGGGTGAGCGGCTCGGGCAAGTCGACCCTGGTCAACCAGATCCTGTTCCGCTCCCTGTCCCACCGGATCCAGGGGTCGCGGGCGGTGCCCGGCAAGCACGACACCATCGACGGGGTGGGCAATGTCGACAAGGTGATCCACGTCGACCAGTCCCCGATCGGGCGGACCCCGCGGTCCAACCCGGCCACCTACACCGGCGTCTTCGACAAGATCCGGGCGCTGTTCGCCCAGACCCCCGAGGCGAAGGTCCGCGGCTATCTTCAGGGCCGGTTCTCCTTCAACGTCAAGGGGGGACGCTGCGAGAACTGCCAGGGCGACGGGACCATCAGGATCGAGATGAACTTCCTGCCCGACGTCTACGTCCCCTGCGAGGTCTGCCACGGGGCCCGGTACAACCGGGAGACCCTCGAGGTGCACTACAAGGGCAAGACGATCGCCGAGGTCCTCGACATGCCGATCGAGGAGGCCTGCGCCTTCTTCGAGCCGATCCAGGCGATCCACCGCCACCTCAAGACCCTGGTCGAGGTGGGACTGGGGTACGTCCGGCTGGGCCAACCGGCCACCACCCTGTCGGGAGGCGAGGCGCAGCGCGTGAAGCTGGCCACCGAACTGGCCCGGCGGTCCACCGGCAACACCCTCTACGTGCTGGACGAGCCGACCACCGGCCTGCACTTCGAGGACATCCGCAAGCTGCTCGCCGTGCTGGGGAGGCTGGTCGATCAGGGCAACTCCGTGATCGTCATCGAGCACAACCTCGACGTCATCAAGACCGCCGACTGGCTCATCGACATGGGCCCGGAGGGCGGCAACGGGGGCGGCACGGTCGTCGTCGAGGGCACCCCGGAGCAGGTCGCCGCATGCCCGCAGTCCTACACCGGGAAGTACCTCAAGGAGGTGCTGGACGGCCACGAGGTGCCGGTCGGCGACCAGCCTGTCGTCATGAGGCCGGTGGCTCACAAGGGGATCGGGCGGACCAGCAGCGCGAAGACTGGAACTGCGAAGACCAGTAGTGGCAAGGCGGGCCGGAAGGCGGCGGGCACCCGCAGGCCCAGCACGGCCGGGGCGACCAGAACCCGGAAAGCCTCCTGA

Protein sequence:

MNPVSDRIIVRGAREHNLRNVSLSLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEIHDYLRLLWARIGVPHCPVCGERISRQTPQQIVDRLIALPEGTRIQVLAPVIQGRKGEYVELFRQLVTDGYTRVRVDGEVHRLDDPPALDKKRKHNIEVVVDRIAIKESAKQRLTESVEAALGLAHGVVAIDFVDREQAAPDRIRRFSENMACPNQHDIDIDELEPRQFSFNGPWGACPECSGLGTTLDVDPDLVVPDRQVSLSDGAIAPWSTPQVANHYRHVFEALGRDNDFDPELAWQDLPAHARALVLHGDGDPVMISYRNRFGRLRSYSQNYEGVMHYVRRRYDEAETDTARSRWGAYLRESPCPACQGRRLKPASLAVTVGDRDIAEVSDLSIGDAWTFLESLELSTRELAISERVVKEVRARLRFLIDVGLDYLTLSRSAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLIRLRDLGNTLIVVEHDEDTIRVADWVVDVGPGAGEHGGRIVVSGPVSELMASRESITGAYLSGRRSIPLPADRRPRTGRDVVVRGARQNNLKGIDVSFPLGQLVVVTGVSGSGKSTLVNQILFRSLSHRIQGSRAVPGKHDTIDGVGNVDKVIHVDQSPIGRTPRSNPATYTGVFDKIRALFAQTPEAKVRGYLQGRFSFNVKGGRCENCQGDGTIRIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKTIAEVLDMPIEEACAFFEPIQAIHRHLKTLVEVGLGYVRLGQPATTLSGGEAQRVKLATELARRSTGNTLYVLDEPTTGLHFEDIRKLLAVLGRLVDQGNSVIVIEHNLDVIKTADWLIDMGPEGGNGGGTVVVEGTPEQVAACPQSYTGKYLKEVLDGHEVPVGDQPVVMRPVAHKGIGRTSSAKTGTAKTSSGKAGRKAAGTRRPSTAGATRTRKAS

GenBank Info

gene - uvrA
locus_tag - FAM19038-p1-1.1_002681
EC_number - 3.1.25.-
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002546754.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - excinuclease ABC subunit UvrA
protein_id - extdb:FAM19038-p1-1.1_002681

Gene Locus

Located on scaffold FAM19038-p1-1_scf1


Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane

FAM19038-p1-1.1_002680
FAM19038-p1-1.1_002682