update range to 10000 bp
locus tag: FAM19038-p1-1.1_002684 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 uvrB
Ortholog
 N0.HOG0001303 excinuclease ABC subunit UvrB
KEGG gene
 K03702 uvrB; excinuclease ABC subunit B kornec03420
Gene Ontology
 GO:0075136 response to host
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0065007 biological regulation
Gene Ontology
 GO:0052572 response to host immune response
Gene Ontology
 GO:0052564 -
Gene Ontology
 GO:0052556 -
Gene Ontology
 GO:0052555 -
Gene Ontology
 GO:0052553 modulation by symbiont of host immune response
Gene Ontology
 GO:0052552 -
Gene Ontology
 GO:0052255 -
Gene Ontology
 GO:0052200 response to host defenses
Gene Ontology
 GO:0052173 response to defenses of other organism
Gene Ontology
 GO:0052031 modulation by symbiont of host defense response
Gene Ontology
 GO:0051817 obsolete modulation of process of other organism involved in symbiotic interaction
Gene Ontology
 GO:0051707 response to other organism
Gene Ontology
 GO:0051704 obsolete multi-organism process
Gene Ontology
 GO:0051701 biological process involved in interaction with host
Gene Ontology
 GO:0051409 response to nitrosative stress
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0050789 regulation of biological process
Gene Ontology
 GO:0050778 positive regulation of immune response
Gene Ontology
 GO:0050776 regulation of immune response
Gene Ontology
 GO:0048584 positive regulation of response to stimulus
Gene Ontology
 GO:0048583 regulation of response to stimulus
Gene Ontology
 GO:0048518 positive regulation of biological process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044419 biological process involved in interspecies interaction between organisms
Gene Ontology
 GO:0044403 biological process involved in symbiotic interaction
Gene Ontology
 GO:0044003 modulation by symbiont of host process
Gene Ontology
 GO:0043207 response to external biotic stimulus
Gene Ontology
 GO:0035821 modulation of process of another organism
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009607 response to biotic stimulus
Gene Ontology
 GO:0009605 response to external stimulus
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0002684 positive regulation of immune system process
Gene Ontology
 GO:0002682 regulation of immune system process
Gene Product
 excinuclease ABC subunit UvrB
Eggnog Protein
 EP:uvrB
Eggnog Ortholog
 EO:COG0556
Eggnog Description
 ED:damaged site

Occurs in the following pathway maps:

Pathway Description
kornec03420 Nucleotide excision repair

Sequences

Nucleotide sequence (GC-content: 66.7 %):

ATGCGCCCCGTCTCAGAGATCACCCGCCGGGTGGCACCCTTCCATGTCGTCAGCGACTTCCAGCCCTCGGGCGACCAGCCGAAGGCCATCGACGAGCTCGAGAAGAGGCTGAAGGCCGGGGAGCAGAACGTCGTGCTGCTCGGCGCCACCGGCACCGGCAAGACGGCCACCGTCGCCTGGTTGGCCGAGCGGGTGCAGCGCCCGATGCTGGTGATGCAGCCCAACAAGACGCTGGCCGCCCAGTTCGCCCAGGAGCTGAGGACCTTCTTCCCCGACAACGCCGTCGAGTACTTCGTGTCCTACTACGACTACTACCAGCCCGAGGCCTACATCCCGCAGAGCGACACCTACATCGAGAAGGACTCCAGCCTCAACGAGGAGGTGGAGAGGCTGCGGCACTCGGCCACCAACTCGCTGCTCACCCGGCGCGACGTCATCGTGGTGGCGACCGTCTCGGCGATCTACGGCCTGGGCACCCCGCAGGAGTACGTGGACCGGATGGTCACCCTGAGGGTCGGTGACGAGTGGGACCGCGACAAGCTGCTGCGCCAGCTGGTCACCGAGCAGTACGTCCGCAACGACCTGGCGGGGGAGCGGGGCACCTTCCGGGTCCACGGCGACACCCTGGAGATCTTCCCGATGTACGAGGAGAACGCGCTGCGGGTGGAGTTCTTCGGCGACGAGATCGAGGCCCTCACCACCCTGCGCCCGCTCACCGGCGAGGTGGTCAGCGAGGACCAGGAGGTCTACGTCTTCCCGGCCACCCACTACGTGGCTGGCCCCGAGCGGATGGAGCGGGCGATCACCGGGATCGAGAAGGAGCTGGCCGACCGGCTGGCCGTGCTGGAGCGCGACGGCAAACTGCTGGAGGCCCAGCGGCTGAAGATGCGCACGAACTACGACATCGAGATGATGCGCCAGGTGGGCAGCTGCGCGGGGATCGAGAACTACTCGCGTCACATCGACGGACGCGAGCCCGGGTCGGCGCCGAACTGCCTGCTCGACTACTTCCCGGAGGACTTCCTGCTGGTGGTCGACGAGTCCCATGTCACCATCCCCCAGATCGGCGGGATGTACGAGGGGGACATGAGCCGCAAGCGCACCCTCGTGGAGCACGGCTTCCGGCTGCCCAGCGCGATGGACAACCGGCCGCTCAAGTTCGACGAGTTCGTCAGCAGGATCGGTCAGACGGTCTATCTGTCGGCCACCCCCGGCCCCTACGAGACCGAGCGGGCCGACGGAGTCGTCGAGCAGATCATCCGCCCCACCGGGCTGGTCGACCCGCAGATCATCGTGAAGTCCACCAAGGGCCAGATCGACGACCTGATGGGCGAGATCCGGATCCGCGTCGAGAAGCAGGAGCGGGTGCTGGTGACCACCCTCACCAAGAAGATGGCCGAGGACCTCACCGACTACCTCATGGAGCACGGCATCCGGACCCGGTACCTGCACTCGGAGATCGACACCCTCAAACGGATCGAACTGCTCAAGCAGCTGCGGATGGGGGAGTTCGACGTGCTGGTCGGCATCAACCTGCTGAGGGAGGGGCTGGACCTTCCCGAGGTCTCCCTGGTCGCCATCCTGGACGCCGACAAGGAGGGCTTCCTGCGCTCGGAGAGGTCCCTCATCCAGACCATCGGTCGAGCCGCCCGCAATGTCAACGGGCAGGTCCACATGTACGCCGACGAGATCACCGACTCGATGCAGGTGGCGATCGACGAGACGAACCGTCGACGCGAGATCCAGATCGCCTACAACACCGAGCACGGCATCGACCCGCAGCCGTTGCGCAAGAAGATCGGCGACATCACCGAGATGCTCGCCCGGGAGGACGCCGACACCGACTCGCTGGTGGCCTCAGTGGCGGGCGGTCGCAAGGGGGCCGATGCCGCCGGGATGGAGGGTCGACGCAATCTGGACACCTCGACGATGGCCGCCTCCCAGCTCGGCGATCTCATCGTTGAGCTGAGCGCCGAGATGCGCCAGGCCGCCGCGGAGCTGAAGTTCGAGGTGGCGGCCCGGCTGCGCGACGAGATCGCCGACCTCAAGCAGGAACTGCGTCAGATGGTCGAGGCCGCCAAGTAG

Protein sequence:

MRPVSEITRRVAPFHVVSDFQPSGDQPKAIDELEKRLKAGEQNVVLLGATGTGKTATVAWLAERVQRPMLVMQPNKTLAAQFAQELRTFFPDNAVEYFVSYYDYYQPEAYIPQSDTYIEKDSSLNEEVERLRHSATNSLLTRRDVIVVATVSAIYGLGTPQEYVDRMVTLRVGDEWDRDKLLRQLVTEQYVRNDLAGERGTFRVHGDTLEIFPMYEENALRVEFFGDEIEALTTLRPLTGEVVSEDQEVYVFPATHYVAGPERMERAITGIEKELADRLAVLERDGKLLEAQRLKMRTNYDIEMMRQVGSCAGIENYSRHIDGREPGSAPNCLLDYFPEDFLLVVDESHVTIPQIGGMYEGDMSRKRTLVEHGFRLPSAMDNRPLKFDEFVSRIGQTVYLSATPGPYETERADGVVEQIIRPTGLVDPQIIVKSTKGQIDDLMGEIRIRVEKQERVLVTTLTKKMAEDLTDYLMEHGIRTRYLHSEIDTLKRIELLKQLRMGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGQVHMYADEITDSMQVAIDETNRRREIQIAYNTEHGIDPQPLRKKIGDITEMLAREDADTDSLVASVAGGRKGADAAGMEGRRNLDTSTMAASQLGDLIVELSAEMRQAAAELKFEVAARLRDEIADLKQELRQMVEAAK

GenBank Info

gene - uvrB
locus_tag - FAM19038-p1-1.1_002684
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015582967.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - excinuclease ABC subunit UvrB
protein_id - extdb:FAM19038-p1-1.1_002684

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002683
FAM19038-p1-1.1_002685