update range to 10000 bp
locus tag: FAM19038-p1-1.1_002686 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
Gene Code
 rpsA
Ortholog
 N0.HOG0001214 30S ribosomal protein S1
KEGG gene
 K02945 RP-S1, rpsA; small subunit ribosomal protein S1 kornec03010
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0030312 external encapsulating structure
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005618 cell wall
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:rpsA
Eggnog Ortholog
 EO:COG0539
Eggnog Description
 ED:ribosomal protein
Gene Product
 30S ribosomal protein S1

Occurs in the following pathway maps:

Pathway Description
kornec03010 Ribosome

Sequences

Nucleotide sequence (GC-content: 65.3 %):

ATGACCTCCCCCACTGAGGCCTCCACCTCGAACACGGTCGCCGCCGGCGACCAGCAGACTGCCGCCACCGCGACCGGAACTGACTCGGTCACCGTTGACGACCTGGGCAGCCCCGAGGCCTTCATGGCCGCCGTGGACGCCACAATCAAGTACTTCAACGACGGTGACATCGTCACCGGCACCGTCGTCAAGGTCGACAGGGACGAGGTTCTCCTCGACATCGGTTACAAGACCGAAGGTGTCATCCCCTCCAAGGAACTCTCCATCAAGCACGACGTCGACCCCTTCGAGGTCGTCCACGTCGGCGATGAGATCGAGGCTCTTGTCCAGCAGAAGGAGGACAAGGAGGGTCGACTGATCCTGTCGAAGAAGCGCGCCCAGTACGAGCGCGCCTGGGGCACGATCGAGAAGATCAAGGATGAGGACGGGGTCGTCAACGGCACCGTGATCGAGGTCGTCAAGGGCGGCCTGATCGTCGACATCGGCCTGCGCGGCTTCCTGCCGGCCTCCCTCGTGGAGATGCGACGGGTCCGCGACCTCCAGCCCTATGTCGGCCAGGAGATCGAGGCCAAGATCATCGAGCTCGACAAGAACCGCAACAATGTGGTCCTGTCGCGTCGCGCCTGGCTCGAGCAGACCCAGTCCGAGGTCCGTCACAACTTCCTGCAGCAGCTGCAGAAGGGGCAGATCCGCAAGGGCGTCGTCTCCTCGATCGTCAACTTCGGTGCCTTCGTCGATCTCGGCGGGGTGGACGGACTGGTCCACGTCTCCGAGCTGTCCTGGAAGCACATCGACCACCCGAGCGAGGTCGTCGAGGTCGGCCAGCCGGTCACCGTCGAGGTGCTGGACGTCGACATGGACCGTGAGCGCGTCTCGCTGTCCCTCAAGGCGACCCAGGAGGATCCGTGGCAGGCCTTCGCCCGTCTGCACCAGATCGGCCAGATCGTTCCCGGCAAGGTCACCAAGCTCGTCCCGTTCGGCGCCTTCGTGCGTGTCGAGGACGGCATCGAGGGCCTTGTCCACGTCTCCGAGCTGGCTGAGCGCCACGTCGACCTGCCCGAGCAGATCGTCTCGGTGGGCCAGGACGTCATGGTCAAGATCATCGACATCGATCTGGACCGCCGCCGTATCTCGCTGTCCCTCAAGCAGGCCAACGAGGGCGTCGACGTCGACTCCGACGAGTTCGACCCGTCGCTGTACGGCATGACCGCCTCCTACGACGAGGACGGCAACTACATCTACCCCGAGGGCTTCGATCCGGAGACCAACGAGTGGAAGGCCGGCTACGACGAGCAGCGAGTGGCCTGGGAGCAGCAGTACGCCGAGGCCCAGTCCCGCTGGGAGGCCCACAAGAAGCAGGTCATCGAGGCCGAGCAGGCCGAGCAGGAGGCCGCCGTCTCCGGCGAGTCCACCGCGTCCTACTCCTCCCCGACCCCCGGTGAGGGTTCGCTGGCCTCCGACGAGGCTCTGCAGGCCCTGCGCGACAAGCTGACCGGCAACTGA

Protein sequence:

MTSPTEASTSNTVAAGDQQTAATATGTDSVTVDDLGSPEAFMAAVDATIKYFNDGDIVTGTVVKVDRDEVLLDIGYKTEGVIPSKELSIKHDVDPFEVVHVGDEIEALVQQKEDKEGRLILSKKRAQYERAWGTIEKIKDEDGVVNGTVIEVVKGGLIVDIGLRGFLPASLVEMRRVRDLQPYVGQEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRHNFLQQLQKGQIRKGVVSSIVNFGAFVDLGGVDGLVHVSELSWKHIDHPSEVVEVGQPVTVEVLDVDMDRERVSLSLKATQEDPWQAFARLHQIGQIVPGKVTKLVPFGAFVRVEDGIEGLVHVSELAERHVDLPEQIVSVGQDVMVKIIDIDLDRRRISLSLKQANEGVDVDSDEFDPSLYGMTASYDEDGNYIYPEGFDPETNEWKAGYDEQRVAWEQQYAEAQSRWEAHKKQVIEAEQAEQEAAVSGESTASYSSPTPGEGSLASDEALQALRDKLTGN

GenBank Info

gene - rpsA
locus_tag - FAM19038-p1-1.1_002686
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014598813.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 30S ribosomal protein S1
protein_id - extdb:FAM19038-p1-1.1_002686

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0041: GO:0005618 cell wall
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19038-p1-1.1_002685