update range to 10000 bp
locus tag: FAM19471-i1-1.1_000223 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 prepilin peptidase
Ortholog
 N0.HOG0003767 prepilin peptidase
KEGG gene
 K02654 pilD, pppA; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
KEGG gene
 K02506 hofD, hopD; leader peptidase HopD [EC:3.4.23.43]
KEGG gene
 K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Eggnog Protein
 EP:pilD
Eggnog Ortholog
 EO:COG1989
Eggnog Description
 ED:aspartic-type endopeptidase activity
EC Number
 EC:3.4.23.43 prepilin peptidase

Sequences

Nucleotide sequence (GC-content: 53.7 %):

ATGATCAAATTCGTAACATTGAGTGGTTTTGCCGTACTTAATGGGCAGGAGGAACTAATTATGGAACAACTAATCGCCTTTTTAACCGGCTCTTGCCTAGCATCGTTCATCGTCACCATGACCCAGCGGCACCTTCTAGAAATGGGACCTTCTTCCCCCCGTTCGCTTTGTGATCACTGCGCCCACCCCCTAGCCTGGTGGCAATTGATTCCCCTCGTCGGCTTCGCCCTTCAGTTGGGGCGGTGCCGGTGGTGCAAAAAAGCCATCGCCCCCTGGTCCAGTGTGTGCGAACTAACTTGCGGAACGTGGTTAGCCCTATACACCCCCCTTGACTTAACCGAGTGGTTAGCAAGCCTAGTCCTGTTAACTGGCCTGTCAGCCATGTCCACTACCGACTGGTACGCCGGGTGGATGAACCCCCTCGCCCTGACTAGCCTACTCCCCCTCCCCTTAATTGCGTTGTCTCCCCTGGGGATAGAACAACCCGCCCTCTTCTTATTAGTGGCGGGATTACTCTCATTGATCACCTTACTTAGCCACGGACTGGGCCTAGGTGATCTTGAATGGCTCTTAGTCGTCTTACTCTTAGCTGGGTGGCAGTGCTATTGGCAAACCCTGCTAATTGGCTGCGGCCTAGCCTTAACCTCCCCTAAGTTATGGCACCGCCAACCACTCCCCTTTTTGCCCTACCTTTCTACCGGGCTGCTCGTTTCATTGTTGATCTAG

Protein sequence:

MIKFVTLSGFAVLNGQEELIMEQLIAFLTGSCLASFIVTMTQRHLLEMGPSSPRSLCDHCAHPLAWWQLIPLVGFALQLGRCRWCKKAIAPWSSVCELTCGTWLALYTPLDLTEWLASLVLLTGLSAMSTTDWYAGWMNPLALTSLLPLPLIALSPLGIEQPALFLLVAGLLSLITLLSHGLGLGDLEWLLVVLLLAGWQCYWQTLLIGCGLALTSPKLWHRQPLPFLPYLSTGLLVSLLI

GenBank Info

locus_tag - FAM19471-i1-1.1_000223
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003681561.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - prepilin peptidase
protein_id - extdb:FAM19471-i1-1.1_000223

Gene Locus

Located on scaffold FAM19471-i1-1_scf2

FAM19471-i1-1.1_000222
FAM19471-i1-1.1_000224